RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 PDCD1Q15116 288 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 SLC9A3R2Q15599 337 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 DEFB112Q30KQ8 113 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 GPR157Q5UAW9 335 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 ZNF529Q6P280 563 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 METAP1DQ6UB28 335 aaPredicted RBP11.66□□□□□ -0.54
COL9A2-208ENST00000488463 C1orf122Q6ZSJ8 110 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 SLC25A26Q70HW3 274 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 C8orf59Q8N0T1 100 aaPredicted RBP11.66□□□□□ -0.54
COL9A2-208ENST00000488463 PIP4P2Q8N4L2 257 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 ZNF561Q8N587 486 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 C11orf42Q8N5U0 333 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 PARP16Q8N5Y8 322 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 OR13C3Q8NGS6 347 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 OR5AK2Q8NH90 309 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 SLAMF9Q96A28 289 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 SPSB1Q96BD6 273 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 CEP19Q96LK0 163 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 UNKLQ9H9P5 680 aaKnown RBP11.66□□□□□ -0.54
COL9A2-208ENST00000488463 SEBOXQ9HB31 216 aaPredicted RBP11.66□□□□□ -0.54
COL9A2-208ENST00000488463 PLCXD1Q9NUJ7 323 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 FKBP14Q9NWM8 211 aa11.66□□□□□ -0.54
COL9A2-208ENST00000488463 TRBV23-1A0A0A0MS06 115 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 IGHV1-69DA0A0B4J2H0 117 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 TMEM89A2RUT3 159 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 RNASEK-C17orf49H0YIS7 233 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 OGG1O15527 345 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 IGHV1-69P01742 117 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 CCDC159P0C7I6 412 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 PIPP12273 146 aaPredicted RBP11.65□□□□□ -0.54
COL9A2-208ENST00000488463 ZNF20P17024 532 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 NDUFB7P17568 137 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 PRKACBP22694 351 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 COMPP49747 757 aaPredicted RBP11.65□□□□□ -0.54
COL9A2-208ENST00000488463 GBX2P52951 348 aaPredicted RBP11.65□□□□□ -0.54
COL9A2-208ENST00000488463 ATP1B3P54709 279 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 MTCP1P56278 107 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 PRB3Q04118 309 aaPredicted RBP11.65□□□□□ -0.54
COL9A2-208ENST00000488463 PDZK1IP1Q13113 114 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 CCDC58Q4VC31 144 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 HCP5Q6MZN7 132 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 RPL22L1Q6P5R6 122 aaKnown RBP11.65□□□□□ -0.54
COL9A2-208ENST00000488463 TMEM185AQ8NFB2 350 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 OR13C9Q8NGT0 318 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 HAVCR2Q8TDQ0 301 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 H1FXQ92522 213 aaKnown RBP11.65□□□□□ -0.54
COL9A2-208ENST00000488463 LHX4Q969G2 390 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 OPALINQ96PE5 141 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 DUX5Q96PT3 197 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 C19orf12Q9NSK7 152 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 ONECUT1Q9UBC0 465 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 PSORS1C1Q9UIG5 152 aa11.65□□□□□ -0.54
COL9A2-208ENST00000488463 TRBV2A0A0J9YWF9 115 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 IRGMA1A4Y4 181 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 K7N7A8 449 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 M0R1W7 72 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 SPRY1O43609 319 aaPredicted RBP11.64□□□□□ -0.55
COL9A2-208ENST00000488463 XPNPEP2O43895 674 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 TK1P04183 234 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 RNASE1P07998 156 aaKnown RBP11.64□□□□□ -0.55
COL9A2-208ENST00000488463 RPSAP08865 295 aaKnown RBP11.64□□□□□ -0.55
COL9A2-208ENST00000488463 BCL3P20749 454 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 ST3GAL4Q11206 333 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 BAMBIQ13145 260 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 MED21Q13503 144 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 LHFPL2Q6ZUX7 228 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 OR52N1Q8NH53 320 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 GATAD2BQ8WXI9 593 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 TMEM80Q96HE8 168 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 SPACA5Q96QH8 159 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 FAM234AQ9H0X4 552 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 ZCCHC4Q9H5U6 513 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 SIRT7Q9NRC8 400 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 RBFOX1Q9NWB1 397 aaKnown RBP11.64□□□□□ -0.55
COL9A2-208ENST00000488463 BABAM2Q9NXR7 383 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 CNOT2Q9NZN8 540 aaKnown RBP11.64□□□□□ -0.55
COL9A2-208ENST00000488463 OR14J1Q9UGF5 321 aa11.64□□□□□ -0.55
COL9A2-208ENST00000488463 EXOSC1Q9Y3B2 195 aaKnown RBP11.64□□□□□ -0.55
COL9A2-208ENST00000488463 TMEM82A0PJX8 343 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 SLC1A7O00341 560 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 INMTO95050 263 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 DLX6P56179 175 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 ZP1P60852 638 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 RPS11P62280 158 aaKnown RBP eCLIP11.63□□□□□ -0.55
COL9A2-208ENST00000488463 COL10A1Q03692 680 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 KLRD1Q13241 179 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 ZNF146Q15072 292 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 TMEM200BQ69YZ2 307 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 DMKNQ6E0U4 476 aaPredicted RBP11.63□□□□□ -0.55
COL9A2-208ENST00000488463 RBMS3Q6XE24 437 aaKnown RBP11.63□□□□□ -0.55
COL9A2-208ENST00000488463 Q6YL49 198 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 TMPRSS11AQ6ZMR5 421 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 C17orf107Q6ZR85 190 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 SERPINA12Q8IW75 414 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 PDZD9Q8IXQ8 264 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 RFT1Q96AA3 541 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 AJUBAQ96IF1 538 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 COMMD4Q9H0A8 199 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 CMYA5Q8N3K9 4069 aa11.63□□□□□ -0.55
COL9A2-208ENST00000488463 KIAA2026Q5HYC2 2103 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms