RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 IMPAD1Q9NX62 359 aa18.35■□□□□ 0.53
PTPN4-211ENST00000488279 WNK1Q9H4A3 2382 aa18.35■□□□□ 0.53
PTPN4-211ENST00000488279 INMTO95050 263 aa18.34■□□□□ 0.53
PTPN4-211ENST00000488279 ZNF728P0DKX0 622 aa18.34■□□□□ 0.53
PTPN4-211ENST00000488279 DLX6P56179 175 aa18.34■□□□□ 0.53
PTPN4-211ENST00000488279 EDDM3BP56851 147 aa18.34■□□□□ 0.53
PTPN4-211ENST00000488279 CNN3Q15417 329 aaKnown RBP18.34■□□□□ 0.53
PTPN4-211ENST00000488279 C2orf68Q2NKX9 166 aa18.34■□□□□ 0.53
PTPN4-211ENST00000488279 C11orf88Q6PI97 169 aa18.34■□□□□ 0.53
PTPN4-211ENST00000488279 LIAT1Q6ZQX7 453 aa18.34■□□□□ 0.53
PTPN4-211ENST00000488279 SLC25A26Q70HW3 274 aa18.34■□□□□ 0.53
PTPN4-211ENST00000488279 RDH10Q8IZV5 341 aa18.34■□□□□ 0.53
PTPN4-211ENST00000488279 DTX3Q8N9I9 347 aa18.34■□□□□ 0.53
PTPN4-211ENST00000488279 PP6455Q8WZ26 134 aa18.34■□□□□ 0.53
PTPN4-211ENST00000488279 LOC107986453A0A1B0GWG9 222 aa18.33■□□□□ 0.52
PTPN4-211ENST00000488279 ZNF737O75373 536 aa18.33■□□□□ 0.52
PTPN4-211ENST00000488279 ZNF85Q03923 595 aa18.33■□□□□ 0.52
PTPN4-211ENST00000488279 TP53I3Q53FA7 332 aa18.33■□□□□ 0.52
PTPN4-211ENST00000488279 CRIP3Q6Q6R5 217 aa18.33■□□□□ 0.52
PTPN4-211ENST00000488279 KCTD20Q7Z5Y7 419 aa18.33■□□□□ 0.52
PTPN4-211ENST00000488279 Q8IYB0 196 aa18.33■□□□□ 0.52
PTPN4-211ENST00000488279 OR13D1Q8NGV5 346 aa18.33■□□□□ 0.52
PTPN4-211ENST00000488279 SIGLEC9Q9Y336 463 aa18.33■□□□□ 0.52
PTPN4-211ENST00000488279 ORC6Q9Y5N6 252 aa18.33■□□□□ 0.52
PTPN4-211ENST00000488279 FAM90A8PA6NJQ4 464 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 TSPAN15O95858 294 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 RBP4P02753 201 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 ARG1P05089 322 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 RBP2P50120 134 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 ATP1B3P54709 279 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 ISL1P61371 349 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 TMEM244Q5VVB8 128 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 Q6ZTK2 550 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 LHFPL4Q7Z7J7 247 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 ENTHD1Q8IYW4 607 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 OR8H2Q8N162 312 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 DNAAF1Q8NEP3 725 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 OR2T6Q8NHC8 308 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 FAM110DQ8TAY7 271 aaPredicted RBP18.32■□□□□ 0.52
PTPN4-211ENST00000488279 PIFOQ8TCI5 191 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 EMG1Q92979 244 aaKnown RBP18.32■□□□□ 0.52
PTPN4-211ENST00000488279 SNX22Q96L94 193 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 NPFFR1Q9GZQ6 430 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 RANBP3Q9H6Z4 567 aaPredicted RBP18.32■□□□□ 0.52
PTPN4-211ENST00000488279 NOTCH1P46531 2555 aa18.32■□□□□ 0.52
PTPN4-211ENST00000488279 VGLL3A8MV65 326 aa18.31■□□□□ 0.52
PTPN4-211ENST00000488279 CYB5AP00167 134 aa18.31■□□□□ 0.52
PTPN4-211ENST00000488279 CSF1P09603 554 aa18.31■□□□□ 0.52
PTPN4-211ENST00000488279 KIR3DL2P43630 455 aa18.31■□□□□ 0.52
PTPN4-211ENST00000488279 EFNB2P52799 333 aa18.31■□□□□ 0.52
PTPN4-211ENST00000488279 ACTC1P68032 377 aa18.31■□□□□ 0.52
PTPN4-211ENST00000488279 ACTA1P68133 377 aa18.31■□□□□ 0.52
PTPN4-211ENST00000488279 MEF2CQ06413 473 aaPredicted RBP18.31■□□□□ 0.52
PTPN4-211ENST00000488279 HERPUD1Q15011 391 aa18.31■□□□□ 0.52
PTPN4-211ENST00000488279 OR2G2Q8NGZ5 317 aa18.31■□□□□ 0.52
PTPN4-211ENST00000488279 PYDC1Q8WXC3 89 aa18.31■□□□□ 0.52
PTPN4-211ENST00000488279 MALSU1Q96EH3 234 aa18.31■□□□□ 0.52
PTPN4-211ENST00000488279 SEBOXQ9HB31 216 aaPredicted RBP18.31■□□□□ 0.52
PTPN4-211ENST00000488279 TBL2Q9Y4P3 447 aaKnown RBP18.31■□□□□ 0.52
PTPN4-211ENST00000488279 TGP01266 2768 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 hADV38S2A0JD32 116 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 DAPL1A0PJW8 107 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 MEX3AA1L020 520 aaKnown RBP18.3■□□□□ 0.52
PTPN4-211ENST00000488279 ENTPD6O75354 484 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 HAND1O96004 215 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 ALPLP05186 524 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 MTCP1P56278 107 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 EDDM3AQ14507 147 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 SLC25A30Q5SVS4 291 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 OR11H6Q8NGC7 330 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 RNF166Q96A37 237 aaPredicted RBP18.3■□□□□ 0.52
PTPN4-211ENST00000488279 FGGYQ96C11 551 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 FOXRED1Q96CU9 486 aaPredicted RBP18.3■□□□□ 0.52
PTPN4-211ENST00000488279 RNFT2Q96EX2 444 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 ADAT3Q96EY9 351 aaPredicted RBP18.3■□□□□ 0.52
PTPN4-211ENST00000488279 HRASLS5Q96KN8 279 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 ZNF714Q96N38 554 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 FRRS1LQ9P0K9 344 aa18.3■□□□□ 0.52
PTPN4-211ENST00000488279 TMEM82A0PJX8 343 aa18.29■□□□□ 0.52
PTPN4-211ENST00000488279 ISG15P05161 165 aa18.29■□□□□ 0.52
PTPN4-211ENST00000488279 IGHV1-8P0DP01 117 aa18.29■□□□□ 0.52
PTPN4-211ENST00000488279 PRKACBP22694 351 aa18.29■□□□□ 0.52
PTPN4-211ENST00000488279 GABRR1P24046 479 aa18.29■□□□□ 0.52
PTPN4-211ENST00000488279 PEX2P28328 305 aa18.29■□□□□ 0.52
PTPN4-211ENST00000488279 SNRPGP62308 76 aaKnown RBP18.29■□□□□ 0.52
PTPN4-211ENST00000488279 PLA1AQ53H76 456 aa18.29■□□□□ 0.52
PTPN4-211ENST00000488279 MEDAGQ5VYS4 303 aa18.29■□□□□ 0.52
PTPN4-211ENST00000488279 UTS2BQ765I0 119 aa18.29■□□□□ 0.52
PTPN4-211ENST00000488279 FAM58AQ8N1B3 248 aa18.29■□□□□ 0.52
PTPN4-211ENST00000488279 CDCA4Q9BXL8 241 aa18.29■□□□□ 0.52
PTPN4-211ENST00000488279 ABCB10Q9NRK6 738 aa18.29■□□□□ 0.52
PTPN4-211ENST00000488279 RBFOX1Q9NWB1 397 aaKnown RBP18.29■□□□□ 0.52
PTPN4-211ENST00000488279 GLS2Q9UI32 602 aa18.29■□□□□ 0.52
PTPN4-211ENST00000488279 IGKV1-9A0A0C4DH69 117 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 SNTNA6NMZ2 147 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 ODF3BA8MYP8 253 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 J3QRE1 110 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 SLC16A6O15403 523 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 CHST1O43916 411 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 OCM2P0CE71 109 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms