RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TRAM1Q15629 374 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 KCNJ8Q15842 424 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 ESCO2Q56NI9 601 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 UNQ9370/PRO34162Q6UXP9 181 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 C1QL2Q7Z5L3 287 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 LURAP1LQ8IV03 231 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 MKXQ8IYA7 352 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 JAGN1Q8N5M9 183 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 ANGPTL6Q8NI99 470 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 C12orf43Q96C57 262 aaKnown RBP9.2□□□□□ -0.94
UBE4B-210ENST00000488228 SSBP3Q9BWW4 388 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-210ENST00000488228 YAE1D1Q9NRH1 226 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 MIOXQ9UGB7 285 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 OR14J1Q9UGF5 321 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 METRNQ9UJH8 293 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 FOXJ3Q9UPW0 622 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 A8MXK9 166 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 TRAPPC2LH3BP13 241 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 TNFRSF13BO14836 293 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-210ENST00000488228 GPX5O75715 221 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 KDM4BO94953 1096 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 CDRT1O95170 752 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 PRKACAP17612 351 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 CALRP27797 417 aaKnown RBP9.19□□□□□ -0.94
UBE4B-210ENST00000488228 GABRA2P47869 451 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 GNB2P62879 340 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 DGUOKQ16854 277 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 SYT6Q5T7P8 510 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-210ENST00000488228 WDR25Q64LD2 544 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-210ENST00000488228 FAM166AQ6J272 317 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 ZNF841Q6ZN19 808 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 ZNF788Q6ZQV5 615 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 LRRTM1Q86UE6 522 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 GLCCI1Q86VQ1 547 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 CD177Q8N6Q3 437 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 OR10K1Q8NGX5 313 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 ST8SIA4Q92187 359 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 TMEM186Q96B77 213 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 CPNE2Q96FN4 548 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-210ENST00000488228 ELL3Q9HB65 397 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-210ENST00000488228 TCF7L1Q9HCS4 588 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 VCX3AQ9NNX9 186 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 RASL12Q9NYN1 266 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 CLN8Q9UBY8 286 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 NF1P21359 2839 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 NAV3Q8IVL0 2385 aa9.19□□□□□ -0.94
UBE4B-210ENST00000488228 TRIM64CA6NLI5 447 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 RFPL4AA6NLU0 287 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 C22orf46C9J442 243 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 RFPL4AL1F8VTS6 287 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 DVL1O14640 695 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 FOXH1O75593 365 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 KNG1P01042 644 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 ALDOBP05062 364 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 ACAA1P09110 424 aaPredicted RBP9.18□□□□□ -0.94
UBE4B-210ENST00000488228 DUSP1P28562 367 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 IL13RA1P78552 427 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 C22orf42Q6IC83 251 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 CD200R1LQ6Q8B3 271 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 SLC36A1Q7Z2H8 476 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 Q8IYB0 196 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 SAXO1Q8IYX7 474 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 FAM58AQ8N1B3 248 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 NKAIN3Q8N8D7 197 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 PNLDC1Q8NA58 520 aaKnown RBP9.18□□□□□ -0.94
UBE4B-210ENST00000488228 TMEM185AQ8NFB2 350 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 OR4D6Q8NGJ1 314 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 PHYHIPQ92561 330 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 NR1H4Q96RI1 486 aaPredicted RBP9.18□□□□□ -0.94
UBE4B-210ENST00000488228 GFI1Q99684 422 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 KCNK15Q9H427 330 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 CNTD2Q9H8S5 307 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 EXOSC4Q9NPD3 245 aaKnown RBP9.18□□□□□ -0.94
UBE4B-210ENST00000488228 MMP26Q9NRE1 261 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 HIF1ANQ9NWT6 349 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 OR5V1Q9UGF6 321 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 KCNS2Q9ULS6 477 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 STUB1Q9UNE7 303 aa9.18□□□□□ -0.94
UBE4B-210ENST00000488228 MRPS28Q9Y2Q9 187 aaKnown RBP9.18□□□□□ -0.94
UBE4B-210ENST00000488228 SVEP1Q4LDE5 3571 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 TRAV20A0A0B4J274 112 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 TRDV1A0A1B0GX56 115 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 A0A1W2PP11 408 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 SHISA3A0PJX4 238 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 A8MV72 311 aaPredicted RBP9.17□□□□□ -0.94
UBE4B-210ENST00000488228 INAFM1C9JVW0 142 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 SIGLEC5O15389 551 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 NDUFA2O43678 99 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 ARL6IP5O75915 188 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 HAND1O96004 215 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 SRMP19623 302 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 SERPINA2P20848 420 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 GADD45AP24522 165 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 PTGFRP43088 359 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 CAPZA1P52907 286 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 DVL1P1P54792 670 aaPredicted RBP9.17□□□□□ -0.94
UBE4B-210ENST00000488228 RSU1Q15404 277 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 ATPAF1Q5TC12 328 aaPredicted RBP9.17□□□□□ -0.94
UBE4B-210ENST00000488228 AWAT2Q6E213 333 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 FIP1L1Q6UN15 594 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms