RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 NPATQ14207 1427 aa0.9□□□□□ -2.26
SMC4-220ENST00000488017 EEA1Q15075 1411 aa0.9□□□□□ -2.26
SMC4-220ENST00000488017 ABCA10Q8WWZ4 1543 aa0.9□□□□□ -2.26
SMC4-220ENST00000488017 SIPA1L1O43166 1804 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 VWA8A3KMH1 1905 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 TRAV8-6A0A0B4J262 113 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 IZUMO1RA6ND01 250 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 GOLGA8JA6NMD2 632 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 H0YC42 278 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 TRDMT1O14717 391 aaKnown RBP0.9□□□□□ -2.27
SMC4-220ENST00000488017 CETN3O15182 167 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 ATP8B1O43520 1251 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 NIPSNAP2O75323 286 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 HSBP1O75506 76 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 UPK1BO75841 260 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 BRI3O95415 125 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 YEATS4O95619 227 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 IGHG2P01859 326 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 TPM1P09493 284 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 SLC35G6P0C7Q6 338 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 GOLGA8HP0CJ92 632 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 GFAPP14136 432 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 HOXB8P17481 243 aaPredicted RBP0.9□□□□□ -2.27
SMC4-220ENST00000488017 CPN2P22792 545 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 PAX6P26367 422 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 GNRHRP30968 328 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 PRSS3P35030 304 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 ARL2P36404 184 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 PPP1R2P41236 205 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 HTR2BP41595 481 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 ACOT2P49753 483 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 RGS6P49758 472 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 OR12D2P58182 307 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 YWHAEP62258 255 aaKnown RBP0.9□□□□□ -2.27
SMC4-220ENST00000488017 SLC35A1P78382 337 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 XIAPP98170 497 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 DR1Q01658 176 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 FMODQ06828 376 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 DOC2AQ14183 400 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 MAPRE2Q15555 327 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 FBXO48Q5FWF7 155 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 LDLRAD2Q5SZI1 272 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 TPRG1LQ5T0D9 272 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 PIP5KL1Q5T9C9 394 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 PLCXD3Q63HM9 321 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 ZNF660Q6AZW8 331 aaPredicted RBP0.9□□□□□ -2.27
SMC4-220ENST00000488017 PPP1R2P3Q6NXS1 205 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 C3orf62Q6ZUJ4 267 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 FA2HQ7L5A8 372 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 MRPL21Q7Z2W9 205 aaKnown RBP0.9□□□□□ -2.27
SMC4-220ENST00000488017 SLC51BQ86UW2 128 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 LRRC8AQ8IWT6 810 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 CYB561A3Q8NBI2 242 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 OR4C13Q8NGP0 309 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 FAM57AQ8TBR7 257 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 GPX8Q8TED1 209 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 GLYATL2Q8WU03 294 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 PIH1D2Q8WWB5 315 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 BAALCQ8WXS3 180 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 ISG20Q96AZ6 181 aaKnown RBP0.9□□□□□ -2.27
SMC4-220ENST00000488017 TMA16Q96EY4 203 aaKnown RBP0.9□□□□□ -2.27
SMC4-220ENST00000488017 MRPL48Q96GC5 212 aaKnown RBP0.9□□□□□ -2.27
SMC4-220ENST00000488017 SMARCD1Q96GM5 515 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 ARL5BQ96KC2 179 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 CATSPER2Q96P56 530 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 OR2V2Q96R30 315 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 C9orf16Q9BUW7 83 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 POTEKPQ9BYX7 375 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 TBL1XR1Q9BZK7 514 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 NSRP1Q9H0G5 558 aaKnown RBP0.9□□□□□ -2.27
SMC4-220ENST00000488017 STMN4Q9H169 189 aaPredicted RBP0.9□□□□□ -2.27
SMC4-220ENST00000488017 OR51B5Q9H339 312 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 DSN1Q9H410 356 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 PSTPIP2Q9H939 334 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 OR2S2Q9NQN1 319 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 ASF1BQ9NVP2 202 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 PAQR5Q9NXK6 330 aaPredicted RBP0.9□□□□□ -2.27
SMC4-220ENST00000488017 TAS2R7Q9NYW3 318 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 TAS2R1Q9NYW7 299 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 HEY1Q9Y5J3 304 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 GMEB1Q9Y692 573 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 SLC22A7Q9Y694 548 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 ADAMTSL3P82987 1691 aa0.9□□□□□ -2.27
SMC4-220ENST00000488017 RTEL1-TNFRSF6BF6WH68 1400 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 PPIP5K1Q6PFW1 1433 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 SSH2Q76I76 1423 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 KIF27Q86VH2 1401 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 ERICH3Q5RHP9 1530 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 LAMC1P11047 1609 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 CEP152O94986 1710 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 LTBP2Q14767 1821 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 PARP14Q460N5 1801 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 KIF13BQ9NQT8 1826 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 NCKAP5O14513 1909 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 SORL1Q92673 2214 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 PRR14LQ5THK1 2151 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 LAMB4A4D0S4 1761 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 RIMS1Q86UR5 1692 aaKnown RBP0.89□□□□□ -2.27
SMC4-220ENST00000488017 IFT140Q96RY7 1462 aa0.89□□□□□ -2.27
SMC4-220ENST00000488017 WDR7Q9Y4E6 1490 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms