RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 AK3Q9UIJ7 227 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 IFITM10A6NMD0 228 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 GEMIN2O14893 280 aaKnown RBP10.82□□□□□ -0.68
HSPG2-211ENST00000486901 F10P00742 488 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 IGHG1P01857 330 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 CFIP05156 583 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 EIF5AP63241 154 aaKnown RBP10.82□□□□□ -0.68
HSPG2-211ENST00000486901 HSD11B2P80365 405 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 ZNF239Q16600 458 aaKnown RBP10.82□□□□□ -0.68
HSPG2-211ENST00000486901 LHFPL1Q86WI0 220 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 NTNG2Q96CW9 530 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 DDIT4LQ96D03 193 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 DOK5Q9P104 306 aa10.82□□□□□ -0.68
HSPG2-211ENST00000486901 DOCK11Q5JSL3 2073 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 EML6Q6ZMW3 1958 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 IGHV3-64DA0A0J9YX35 117 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.81□□□□□ -0.68
HSPG2-211ENST00000486901 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.81□□□□□ -0.68
HSPG2-211ENST00000486901 TIAF1O95411 115 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 TRGC2P03986 189 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 ZNF728P0DKX0 622 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 MMP9P14780 707 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 S100PP25815 95 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 GUCA1AP43080 201 aaPredicted RBP10.81□□□□□ -0.68
HSPG2-211ENST00000486901 UBE2KP61086 200 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 SLC35A1P78382 337 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 C9orf135Q5VTT2 229 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 CCDC54Q8NEL0 328 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 ZNF385AQ96PM9 386 aaKnown RBP10.81□□□□□ -0.68
HSPG2-211ENST00000486901 CCNL2Q96S94 520 aaPredicted RBP10.81□□□□□ -0.68
HSPG2-211ENST00000486901 PCNX1Q96RV3 2341 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 CUL9Q8IWT3 2517 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 TLCD2A6NGC4 264 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 HMGB3O15347 200 aaKnown RBP10.81□□□□□ -0.68
HSPG2-211ENST00000486901 IGHV2-70P01814 119 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 HLA-HP01893 362 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 HOXC4P09017 264 aaPredicted RBP10.81□□□□□ -0.68
HSPG2-211ENST00000486901 FABP4P15090 132 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 APOBEC1P41238 236 aaKnown RBP10.81□□□□□ -0.68
HSPG2-211ENST00000486901 TAS2R46P59540 309 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 RSU1Q15404 277 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 KIAA0895LQ68EN5 471 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 ZNF107Q9UII5 783 aaPredicted RBP10.81□□□□□ -0.68
HSPG2-211ENST00000486901 IGKV3D-11A0A0A0MRZ8 115 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 CCNOP22674 350 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 S100A2P29034 98 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 FGF8P55075 233 aaPredicted RBP10.81□□□□□ -0.68
HSPG2-211ENST00000486901 IL15RAQ13261 267 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 CXorf66Q5JRM2 361 aaPredicted RBP10.81□□□□□ -0.68
HSPG2-211ENST00000486901 CYB561D1Q8N8Q1 229 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 NECAP1Q8NC96 275 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 RAB39BQ96DA2 213 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 SCGB3A2Q96PL1 93 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 TMPRSS5Q9H3S3 457 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 SDHAF3Q9NRP4 125 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 HSF4Q9ULV5 492 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 HS3ST3B1Q9Y662 390 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 AKAP6Q13023 2319 aa10.81□□□□□ -0.68
HSPG2-211ENST00000486901 BORCS7-ASMTA0A0B4J1R7 106 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 NKX2-6A6NCS4 301 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 POU2F2P09086 479 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 TUBG1P23258 451 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 NSUN5P2Q63ZY6 315 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 UBAC2Q8NBM4 344 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 ACACAQ13085 2346 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 FREM1Q5H8C1 2179 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 ZFP92A6NM28 416 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 C5orf67F2Z3F1 127 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 H3BQ15 152 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 BLKP51451 505 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 ERVFRD-1P60508 538 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 IGFBP7Q16270 282 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 NKAIN1Q4KMZ8 207 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 ALKBH2Q6NS38 261 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 Q8WTZ3 238 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 SLC35B3Q9H1N7 401 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 DNAJB11Q9UBS4 358 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 KCNIP3Q9Y2W7 256 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 TBPP20226 339 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 RPS16P62249 146 aaKnown RBP10.8□□□□□ -0.68
HSPG2-211ENST00000486901 DEFA6Q01524 100 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 C17orf67Q0P5P2 114 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 CYB5R2Q6BCY4 276 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 OPN5Q6U736 354 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 FBXL14Q8N1E6 418 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 SLC35G3Q8N808 338 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 NOXO1Q8NFA2 376 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 OR5T1Q8NG75 326 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 TP53RKQ96S44 253 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 ZNF576Q9H609 170 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 ANXA10Q9UJ72 324 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 STARD10Q9Y365 291 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 HS3ST3A1Q9Y663 406 aa10.8□□□□□ -0.68
HSPG2-211ENST00000486901 ZNF724A8MTY0 619 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 OR7C1O76099 320 aaPredicted RBP10.79□□□□□ -0.68
HSPG2-211ENST00000486901 HEXBP07686 556 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 DANCRP0C864 163 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 PGA4P0DJD7 388 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 PGA3P0DJD8 388 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 GAMTQ14353 236 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms