RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 IMPDH1P20839 514 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 FKBP2P26885 142 aaKnown RBP5.77□□□□□ -1.49
HDAC3-209ENST00000486618 SSTR5P35346 364 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 HILS1P60008 231 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 PLP1P60201 277 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 CDC42P60953 191 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 RAP1BP61224 184 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 NUTF2P61970 127 aaKnown RBP5.77□□□□□ -1.49
HDAC3-209ENST00000486618 QPRTQ15274 297 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 TIGD2Q4W5G0 525 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 ACSM3Q53FZ2 586 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 UNC50Q53HI1 259 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 SYT14P1Q58G82 188 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 C19orf54Q5BKX5 351 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 ZNF678Q5SXM1 525 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 OGFRL1Q5TC84 451 aaPredicted RBP5.77□□□□□ -1.49
HDAC3-209ENST00000486618 NOXRED1Q6NXP6 359 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 EMBQ6PCB8 327 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 FAM131AQ6UXB0 335 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 H2BFWTQ7Z2G1 175 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 PEG10Q86TG7 708 aaKnown RBP5.77□□□□□ -1.49
HDAC3-209ENST00000486618 RNF130Q86XS8 419 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 STPG2Q8N412 459 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 ZNF614Q8N883 585 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 LRRC75AQ8NAA5 344 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 OR5L1Q8NGL2 311 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 NPIPB3Q92617 1050 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 UFD1Q92890 307 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 RPL3LQ92901 407 aaKnown RBP5.77□□□□□ -1.49
HDAC3-209ENST00000486618 PPCDCQ96CD2 204 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 L3HYPDHQ96EM0 354 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 FMO2Q99518 471 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 TSNAXQ99598 290 aaKnown RBP5.77□□□□□ -1.49
HDAC3-209ENST00000486618 PLEKHA1Q9HB21 404 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 CYSLTR2Q9NS75 346 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 CA10Q9NS85 328 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 ACSS1Q9NUB1 689 aaPredicted RBP5.77□□□□□ -1.49
HDAC3-209ENST00000486618 IMPAD1Q9NX62 359 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 P2RX2Q9UBL9 471 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 PKD1L1Q8TDX9 2849 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 CENPXA8MT69 81 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 HSBP1O75506 76 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 RGS11O94810 467 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 ANP32DO95626 131 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 OR4A8P0C604 315 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 PGCP20142 388 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 MPGP29372 298 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 GNRHRP30968 328 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 IL2RGP31785 369 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 RPL3P39023 403 aaKnown RBP5.76□□□□□ -1.49
HDAC3-209ENST00000486618 APOBEC1P41238 236 aaKnown RBP5.76□□□□□ -1.49
HDAC3-209ENST00000486618 VEGFCP49767 419 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 FOXG1P55316 489 aaPredicted RBP5.76□□□□□ -1.49
HDAC3-209ENST00000486618 ERVK11-1P61568 191 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 DLK1P80370 383 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 PSG5Q15238 335 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 KCNJ8Q15842 424 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 AWAT1Q58HT5 328 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 PDZD11Q5EBL8 140 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 UTF1Q5T230 341 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 FAM219BQ5XKK7 198 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 STUMQ69YW2 141 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 CASP12Q6UXS9 341 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 SSX7Q7RTT5 188 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 ANGPTL5Q86XS5 388 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 OR4F15Q8NGB8 312 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 OR52L2PQ8NGH6 319 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 OR52E4Q8NGH9 312 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 OR6N2Q8NGY6 317 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 C10orf35Q96D05 121 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 MCRIP2Q9BUT9 160 aaKnown RBP5.76□□□□□ -1.49
HDAC3-209ENST00000486618 ZNF747Q9BV97 191 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 SYT4Q9H2B2 425 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 PPA2Q9H2U2 334 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 REEP4Q9H6H4 257 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 DCLRE1BQ9H816 532 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 TMBIM4Q9HC24 238 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 GPR173Q9NS66 373 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 GLS2Q9UI32 602 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 KCNG2Q9UJ96 466 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 RNF150Q9ULK6 438 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 HDGFL3Q9Y3E1 203 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 CDH10Q9Y6N8 788 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 SVEP1Q4LDE5 3571 aa5.76□□□□□ -1.49
HDAC3-209ENST00000486618 A0A1W2PRD5 423 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 TGOLN2O43493 480 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 SC5DO75845 299 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 CYP7B1O75881 506 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 PMS2P2O95744 297 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 HMGN2P05204 90 aaKnown RBP5.75□□□□□ -1.49
HDAC3-209ENST00000486618 MSMBP08118 114 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 NDUFB7P17568 137 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 ATP6V1B2P21281 511 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 PAX6P26367 422 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 HPCAL1P37235 193 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 CDX1P47902 265 aaPredicted RBP5.75□□□□□ -1.49
HDAC3-209ENST00000486618 MTCP1P56278 107 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 UBE2KP61086 200 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 UBE2NP61088 152 aaKnown RBP5.75□□□□□ -1.49
HDAC3-209ENST00000486618 MRPS11P82912 194 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms