RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 MIDNQ504T8 468 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 TP53I3Q53FA7 332 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 AWAT1Q58HT5 328 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 LCE1DQ5T752 114 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 TTC23Q5W5X9 447 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 NCR3LG1Q68D85 454 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 SHISA2Q6UWI4 295 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 BRD3OSQ6XYD6 125 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 VMO1Q7Z5L0 202 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 ANGPTL5Q86XS5 388 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 RDH10Q8IZV5 341 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 FGFRL1Q8N441 504 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 PACRGLQ8N7B6 248 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 C3orf56Q8N813 242 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 DYRK2Q92630 601 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 LHX4Q969G2 390 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 BORCS8Q96FH0 119 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 SNX22Q96L94 193 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 DPAGT1Q9H3H5 408 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 HEXA-AS1Q9H8Q6 139 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 FGF20Q9NP95 211 aaPredicted RBP5.74□□□□□ -1.49
VPS50-218ENST00000485994 MTCH1Q9NZJ7 389 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 GNG8Q9UK08 70 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 HHLA2Q9UM44 414 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 GTF2A1LQ9UNN4 478 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 SF3B6Q9Y3B4 125 aaKnown RBP5.74□□□□□ -1.49
VPS50-218ENST00000485994 SOX21Q9Y651 276 aaPredicted RBP5.74□□□□□ -1.49
VPS50-218ENST00000485994 HSPE1-MOB4S4R3N1 261 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 PKD1L1Q8TDX9 2849 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 IGHV3OR16-10A0A075B7F0 116 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 IGKV1-9A0A0C4DH69 117 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 TRBV2A0A0J9YWF9 115 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 LOC107986453A0A1B0GWG9 222 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 hCG_1809904A0A1W2PP81 198 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 A0A1W2PPE2 198 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 A0A1W2PR64 198 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 A0A1W2PRV1 198 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 TMEM212A6NML5 194 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 C17orf98A8MV24 154 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 J3QLW9 94 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 HOXA3O43365 443 aaPredicted RBP5.73□□□□□ -1.49
VPS50-218ENST00000485994 ZNF737O75373 536 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 NXPH2O95156 264 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 APOL3O95236 402 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 RBP4P02753 201 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 FBP1P09467 338 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 SELLP14151 372 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 ZNF19P17023 458 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 NDUFB7P17568 137 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 EEF1B2P24534 225 aaKnown RBP5.73□□□□□ -1.49
VPS50-218ENST00000485994 DCKP27707 260 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 ERP29P30040 261 aaKnown RBP5.73□□□□□ -1.49
VPS50-218ENST00000485994 RPL31P62899 125 aaKnown RBP5.73□□□□□ -1.49
VPS50-218ENST00000485994 ZNF91Q05481 1191 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 MEF2CQ06413 473 aaPredicted RBP5.73□□□□□ -1.49
VPS50-218ENST00000485994 CCDC58Q4VC31 144 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 DMRTC1Q5HYR2 192 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 TMEM200BQ69YZ2 307 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 HCP5Q6MZN7 132 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 LHFPL2Q6ZUX7 228 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 LHFPL3Q86UP9 236 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 SERPINA12Q8IW75 414 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 SAXO1Q8IYX7 474 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 PARP16Q8N5Y8 322 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 ZNF555Q8NEP9 628 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 Q8NFD4 153 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 OR5D14Q8NGL3 314 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 RPS4Y2Q8TD47 263 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 SPSB1Q96BD6 273 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 FGGYQ96C11 551 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 ADAT3Q96EY9 351 aaPredicted RBP5.73□□□□□ -1.49
VPS50-218ENST00000485994 C4orf36Q96KX1 117 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 CEP19Q96LK0 163 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 ZNF696Q9H7X3 374 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 PLEKHA1Q9HB21 404 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 NEK6Q9HC98 313 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 ERVK13-1Q9NX77 482 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 SMPD3Q9NY59 655 aaPredicted RBP5.73□□□□□ -1.49
VPS50-218ENST00000485994 ONECUT1Q9UBC0 465 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 MYRFQ9Y2G1 1151 aa5.73□□□□□ -1.49
VPS50-218ENST00000485994 FAM230AA0A1W2PPH8 454 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 A0A1W2PQ09 198 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 IRGMA1A4Y4 181 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 A6NIN4 97 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 FAM90A8PA6NJQ4 464 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 CASQ2O14958 399 aaPredicted RBP5.72□□□□□ -1.49
VPS50-218ENST00000485994 NPFFO15130 113 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 WBP4O75554 376 aaKnown RBP5.72□□□□□ -1.49
VPS50-218ENST00000485994 TSPAN9O75954 239 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 ZFPL1O95159 310 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 CYB5AP00167 134 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 CRYBA1P05813 215 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 CCDC159P0C7I6 412 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 LIMS3P0CW19 117 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 LIMS4P0CW20 117 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 GBX2P52951 348 aaPredicted RBP5.72□□□□□ -1.49
VPS50-218ENST00000485994 MTCP1P56278 107 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 GMFBP60983 142 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 ADARB1P78563 741 aaKnown RBP5.72□□□□□ -1.49
VPS50-218ENST00000485994 PDZK1IP1Q13113 114 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms