RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 WIPI2Q9Y4P8 454 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 ANK3Q12955 4377 aaKnown RBP14.31□□□□□ -0.12
VIM-205ENST00000485947 PQLC2LA1A4F0 135 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 ARSBP15848 533 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 CA6P23280 308 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 GATA3P23771 443 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 ETV6P41212 452 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 POU3F4P49335 361 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 MTCP1P56278 107 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 CLDN12P56749 244 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 GNG3P63215 75 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 MZT1Q08AG7 82 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 TMEM255AQ5JRV8 349 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 UBE2NLQ5JXB2 153 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 AWAT2Q6E213 333 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 CRIP3Q6Q6R5 217 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 LAX1Q8IWV1 398 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 OR51D1Q8NGF3 324 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 OR4D6Q8NGJ1 314 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 OR13G1Q8NGZ3 307 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 OR8S1Q8NH09 359 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 CCL17Q92583 94 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 PTX4Q96A99 478 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 SPACA5Q96QH8 159 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 MIXL1Q9H2W2 232 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 ZNF665Q9H7R5 613 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 HMG20AQ9NP66 347 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 TREM2Q9NZC2 230 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 FBLN5Q9UBX5 448 aa14.31□□□□□ -0.12
VIM-205ENST00000485947 TMEM210A6NLX4 147 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 HPGDSO60760 199 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 APOA1P02647 267 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 TNFSF8P32971 234 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 PTGFRP43088 359 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 ZP1P60852 638 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 P2RY14Q15391 338 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 OR8G1Q15617 311 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 OR2W3Q7Z3T1 314 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 CCDC190Q86UF4 302 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 ANGPTL5Q86XS5 388 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 SAMD12Q8N8I0 201 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 OR5H6Q8NGV6 325 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 TNFAIP8L1Q8WVP5 186 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 RAB40AQ8WXH6 277 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 GTF3AQ92664 365 aaKnown RBP14.3□□□□□ -0.12
VIM-205ENST00000485947 RNF170Q96K19 258 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 S100A13Q99584 98 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 WDR12Q9GZL7 423 aaKnown RBP14.3□□□□□ -0.12
VIM-205ENST00000485947 ABCG5Q9H222 651 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 PPP1R3EQ9H7J1 279 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 MSL2Q9HCI7 577 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 AKIP1Q9NQ31 210 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 HIF1ANQ9NWT6 349 aa14.3□□□□□ -0.12
VIM-205ENST00000485947 IGKV1-27A0A075B6S5 117 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 A0A0B4J203 849 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 RNF212BA8MTL3 300 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 ZNF732B4DXR9 585 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 FAM157AC9JC47 383 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 J3QLI3 93 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 PHF1O43189 567 aaPredicted RBP14.29□□□□□ -0.12
VIM-205ENST00000485947 FSTL3O95633 263 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 IGHV2-5P01817 119 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 RAB6AP20340 208 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 SRP14P37108 136 aaKnown RBP14.29□□□□□ -0.12
VIM-205ENST00000485947 OR3A4PP47883 348 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 ZNF45Q02386 682 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 ZNF846Q147U1 533 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 C2orf76Q3KRA6 126 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 SPANXN2Q5MJ10 180 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 METAP1DQ6UB28 335 aaPredicted RBP14.29□□□□□ -0.12
VIM-205ENST00000485947 GLIPR1L1Q6UWM5 242 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 ZNF573Q86YE8 665 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 ZSCAN4Q8NAM6 433 aaPredicted RBP14.29□□□□□ -0.12
VIM-205ENST00000485947 PXT1Q8NFP0 134 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 TMEM106BQ9NUM4 274 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 C14orf119Q9NWQ9 140 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 RABL2AQ9UBK7 228 aaPredicted RBP14.29□□□□□ -0.12
VIM-205ENST00000485947 RABL2BQ9UNT1 228 aa14.29□□□□□ -0.12
VIM-205ENST00000485947 CUBNO60494 3623 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 PPIAL4EA0A075B759 164 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 A0A0A6YYJ9 748 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 PPIAL4CA0A0B4J2A2 164 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 TMEM272A0A1B0GTI8 110 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 FAM25AB3EWG3 89 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 FAM25CB3EWG5 89 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 FAM25GB3EWG6 89 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 PPIAL4DF5H284 164 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 WNT9BO14905 357 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 LDLRAD4O15165 306 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 PPIAL4FP0DN26 164 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 TALDO1P37837 337 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 GPM6AP51674 278 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 GPR176Q14439 515 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 FAM189A2Q15884 450 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 TMEM155Q4W5P6 130 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 FAM76BQ5HYJ3 339 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 DMRTC1Q5HYR2 192 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 ASCL4Q6XD76 172 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 RNF144BQ7Z419 303 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 SAXO1Q8IYX7 474 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms