RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 BCL6BQ8N143 479 aaPredicted RBP4.71□□□□□ -1.66
CUX1-208ENST00000485792 CD177Q8N6Q3 437 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 FAM216BQ8N7L0 139 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 Q8N7P7 452 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 ZNF555Q8NEP9 628 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 OR8B3Q8NGG8 313 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 OR13C5Q8NGS8 318 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 OR52N1Q8NH53 320 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 SPATA3Q8NHX4 192 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 NANPQ8TBE9 248 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 TNFRSF14Q92956 283 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 ORAI1Q96D31 301 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 AJUBAQ96IF1 538 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 FAM71F1Q96KD3 344 aaPredicted RBP4.71□□□□□ -1.66
CUX1-208ENST00000485792 C4orf36Q96KX1 117 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 PGLYRP3Q96LB9 341 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 GAFA1Q96PS6 74 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 OR8B2Q96RD0 313 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 MYCBPQ99417 103 aaPredicted RBP4.71□□□□□ -1.66
CUX1-208ENST00000485792 ALG8Q9BVK2 526 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 DUSP21Q9H596 190 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 UBAP1Q9NZ09 502 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 MTCH1Q9NZJ7 389 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 CLN8Q9UBY8 286 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 PSORS1C1Q9UIG5 152 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 RPUSD1Q9UJJ7 312 aaKnown RBP4.71□□□□□ -1.66
CUX1-208ENST00000485792 HHLA2Q9UM44 414 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 CAB39Q9Y376 341 aaPredicted RBP4.71□□□□□ -1.66
CUX1-208ENST00000485792 N6AMT1Q9Y5N5 214 aa4.71□□□□□ -1.66
CUX1-208ENST00000485792 DNAH3Q8TD57 4116 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 PLXNB1O43157 2135 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 TRBV5-5A0A0J9YX44 114 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 ISPDA4D126 451 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 TMEM212A6NML5 194 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 OR2AT4A6NND4 320 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 NOTOA8MTQ0 251 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 ZNF879B4DU55 563 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 CLDN34H7C241 214 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 AKR7A2O43488 359 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 ADAM20O43506 726 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 SYT7O43581 403 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 SC5DO75845 299 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 GYPAP02724 150 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 SFTPBP07988 381 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 IGHV4-38-2P0DP08 117 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 LMO1P25800 156 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 ATP6V1E1P36543 226 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 GTF2A1P52655 376 aaPredicted RBP4.7□□□□□ -1.66
CUX1-208ENST00000485792 AQP4P55087 323 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 HILS1P60008 231 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 ERVFRD-1P60508 538 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 ZP1P60852 638 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 GNB2P62879 340 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 SLC35A2P78381 396 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 PAX5Q02548 391 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 ST3GAL4Q11206 333 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 INSL4Q14641 139 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 IRF3Q14653 427 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 ZNF146Q15072 292 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 CDK5R1Q15078 307 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 DGUOKQ16854 277 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 ODF4Q2M2E3 257 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 OR2G6Q5TZ20 316 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 RUSC1-AS1Q66K80 236 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 ELP2Q6IA86 826 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 FAHD2BQ6P2I3 314 aaPredicted RBP4.7□□□□□ -1.66
CUX1-208ENST00000485792 RPL22L1Q6P5R6 122 aaKnown RBP4.7□□□□□ -1.66
CUX1-208ENST00000485792 MOB3CQ70IA8 216 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 SAXO1Q8IYX7 474 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 KIR3DL3Q8N743 410 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 NANOGP1Q8N7R0 232 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 ZDHHC22Q8N966 263 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 SETD9Q8NE22 299 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 ZNF671Q8TAW3 534 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 FAHD2AQ96GK7 314 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 MED30Q96HR3 178 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 TBX15Q96SF7 602 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 NUDT16L1Q9BRJ7 211 aaKnown RBP4.7□□□□□ -1.66
CUX1-208ENST00000485792 DCTN5Q9BTE1 182 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 CDCA4Q9BXL8 241 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 ANKRD60Q9BZ19 345 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 RHOFQ9HBH0 211 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 BABAM2Q9NXR7 383 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 NLKQ9UBE8 527 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 FBLN5Q9UBX5 448 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 CLEC2DQ9UHP7 191 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 GNG8Q9UK08 70 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 NUP50Q9UKX7 468 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 LSM2Q9Y333 95 aaKnown RBP4.7□□□□□ -1.66
CUX1-208ENST00000485792 EXOSC1Q9Y3B2 195 aaKnown RBP4.7□□□□□ -1.66
CUX1-208ENST00000485792 KPTNQ9Y664 436 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 AUP1Q9Y679 476 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 NBEAL1Q6ZS30 2694 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 FBN3Q75N90 2809 aa4.7□□□□□ -1.66
CUX1-208ENST00000485792 IGHV3OR16-10A0A075B7F0 116 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 TRBV5-7A0A0A0MS05 114 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 CENPVL3A0A0U1RRI6 287 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 A0A1B0GVI7 797 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 IRGMA1A4Y4 181 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 EFCAB10A6NFE3 127 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms