RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 ALDH3B2P48448 385 aa16.61■□□□□ 0.25
COL6A2-208ENST00000485591 GZMKP49863 264 aa16.61■□□□□ 0.25
COL6A2-208ENST00000485591 ELP2Q6IA86 826 aa16.61■□□□□ 0.25
COL6A2-208ENST00000485591 GDPGP1Q6ZNW5 385 aa16.61■□□□□ 0.25
COL6A2-208ENST00000485591 ZNF788Q6ZQV5 615 aa16.61■□□□□ 0.25
COL6A2-208ENST00000485591 FAM58AQ8N1B3 248 aa16.61■□□□□ 0.25
COL6A2-208ENST00000485591 OR5T2Q8NGG2 359 aa16.61■□□□□ 0.25
COL6A2-208ENST00000485591 OR8B3Q8NGG8 313 aa16.61■□□□□ 0.25
COL6A2-208ENST00000485591 OR8B2Q96RD0 313 aa16.61■□□□□ 0.25
COL6A2-208ENST00000485591 HMG20AQ9NP66 347 aa16.61■□□□□ 0.25
COL6A2-208ENST00000485591 CTSZQ9UBR2 303 aa16.61■□□□□ 0.25
COL6A2-208ENST00000485591 MRPS28Q9Y2Q9 187 aaKnown RBP16.61■□□□□ 0.25
COL6A2-208ENST00000485591 ZNF469Q96JG9 3925 aaPredicted RBP16.61■□□□□ 0.25
COL6A2-208ENST00000485591 SHISA3A0PJX4 238 aa16.6■□□□□ 0.25
COL6A2-208ENST00000485591 FAM157AC9JC47 383 aa16.6■□□□□ 0.25
COL6A2-208ENST00000485591 TMPRSS2O15393 492 aa16.6■□□□□ 0.25
COL6A2-208ENST00000485591 MTNR1BP49286 362 aa16.6■□□□□ 0.25
COL6A2-208ENST00000485591 BMXP51813 675 aa16.6■□□□□ 0.25
COL6A2-208ENST00000485591 SPIN3Q5JUX0 258 aa16.6■□□□□ 0.25
COL6A2-208ENST00000485591 C1orf100Q5SVJ3 147 aa16.6■□□□□ 0.25
COL6A2-208ENST00000485591 FIP1L1Q6UN15 594 aaKnown RBP16.6■□□□□ 0.25
COL6A2-208ENST00000485591 SLC36A1Q7Z2H8 476 aa16.6■□□□□ 0.25
COL6A2-208ENST00000485591 Q8NFD4 153 aa16.6■□□□□ 0.25
COL6A2-208ENST00000485591 OR4D6Q8NGJ1 314 aa16.6■□□□□ 0.25
COL6A2-208ENST00000485591 S100A13Q99584 98 aa16.6■□□□□ 0.25
COL6A2-208ENST00000485591 CCL13Q99616 98 aa16.6■□□□□ 0.25
COL6A2-208ENST00000485591 GFI1Q99684 422 aa16.6■□□□□ 0.25
COL6A2-208ENST00000485591 AK6Q9Y3D8 172 aaKnown RBP16.6■□□□□ 0.25
COL6A2-208ENST00000485591 MAP1AP78559 2803 aaPredicted RBP16.6■□□□□ 0.25
COL6A2-208ENST00000485591 DOCK11Q5JSL3 2073 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 LOC100506127A0A0U1RQW1 187 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 RFPL4AA6NLU0 287 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 A8MXK9 166 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 RFPL4AL1F8VTS6 287 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 PDCD5O14737 125 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 CDRT1O95170 752 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 PRKACAP17612 351 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 PITPNBP48739 271 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 PSMD7P51665 324 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 FGF12P61328 243 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 SEC61A1P61619 476 aaKnown RBP16.59■□□□□ 0.25
COL6A2-208ENST00000485591 KRTAP1-1Q07627 177 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 RSU1Q15404 277 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 ESCO2Q56NI9 601 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 AWAT2Q6E213 333 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 OR6M1Q8NGM8 313 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 TBC1D15Q8TC07 691 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 SDSLQ96GA7 329 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 KCTD7Q96MP8 289 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 GAFA1Q96PS6 74 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 FUNDC2Q9BWH2 189 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 METTL9Q9H1A3 318 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 SEBOXQ9HB31 216 aaPredicted RBP16.59■□□□□ 0.25
COL6A2-208ENST00000485591 ELL3Q9HB65 397 aaPredicted RBP16.59■□□□□ 0.25
COL6A2-208ENST00000485591 IL36RNQ9UBH0 155 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 ING4Q9UNL4 249 aa16.59■□□□□ 0.25
COL6A2-208ENST00000485591 B4DSR2 109 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 SIGLEC5O15389 551 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 AIREO43918 545 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 ZNF780AO75290 641 aaPredicted RBP16.58■□□□□ 0.24
COL6A2-208ENST00000485591 GABRA2P47869 451 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 NPY4RP50391 375 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 IL13RA1P78552 427 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 GPR176Q14439 515 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 ZNF146Q15072 292 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 GLIPR1L1Q6UWM5 242 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 ZNF841Q6ZN19 808 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 CD177Q8N6Q3 437 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 FAM216BQ8N7L0 139 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 LINC01356Q8N9X3 169 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 OR10K1Q8NGX5 313 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 MSI2Q96DH6 328 aaKnown RBP16.58■□□□□ 0.24
COL6A2-208ENST00000485591 MED30Q96HR3 178 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 C1orf147Q96MC9 270 aaPredicted RBP16.58■□□□□ 0.24
COL6A2-208ENST00000485591 CENPOQ9BU64 300 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 SSBP3Q9BWW4 388 aaPredicted RBP16.58■□□□□ 0.24
COL6A2-208ENST00000485591 GHRLQ9UBU3 117 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 OR14J1Q9UGF5 321 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 V9GY05 133 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 MED13LQ71F56 2210 aa16.58■□□□□ 0.24
COL6A2-208ENST00000485591 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.57■□□□□ 0.24
COL6A2-208ENST00000485591 A0A1B0GW55 424 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 SLC17A2O00624 439 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 SLC22A1O15245 554 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 FOXH1O75593 365 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 CSTBP04080 98 aaKnown RBP16.57■□□□□ 0.24
COL6A2-208ENST00000485591 TFF1P04155 84 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 UBBP0CG47 229 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 DUX4L2P0CJ85 424 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 DUX4L3P0CJ86 424 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 DUX4L4P0CJ87 422 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 DUX4L5P0CJ88 424 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 DUX4L6P0CJ89 424 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 DUX4L7P0CJ90 424 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 RAB3BP20337 219 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 HTR2CP28335 458 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 PRDX2P32119 198 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 CEBPDP49716 269 aaPredicted RBP16.57■□□□□ 0.24
COL6A2-208ENST00000485591 GNB2P62879 340 aa16.57■□□□□ 0.24
COL6A2-208ENST00000485591 DGUOKQ16854 277 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms