RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 EXOSC4Q9NPD3 245 aaKnown RBP9.88□□□□□ -0.83
APTX-227ENST00000485479 ISYNA1Q9NPH2 558 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 HIF1ANQ9NWT6 349 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 KIAA1324LA8MWY0 1029 aaPredicted RBP9.88□□□□□ -0.83
APTX-227ENST00000485479 F5H0A9 414 aaPredicted RBP9.88□□□□□ -0.83
APTX-227ENST00000485479 TRAPPC2LH3BP13 241 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 CCRL2O00421 344 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 TNFRSF13BO14836 293 aaPredicted RBP9.88□□□□□ -0.83
APTX-227ENST00000485479 FN1P02751 2386 aaKnown RBP9.88□□□□□ -0.83
APTX-227ENST00000485479 MSMBP08118 114 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 MUC1P15941 1255 aaPredicted RBP9.88□□□□□ -0.83
APTX-227ENST00000485479 FSTP19883 344 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 TGFBR1P36897 503 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 GPR50Q13585 617 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 HSD17B12Q53GQ0 312 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 ESCO2Q56NI9 601 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 UNQ9370/PRO34162Q6UXP9 181 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 ZNF841Q6ZN19 808 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 LINC01356Q8N9X3 169 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 OR8B3Q8NGG8 313 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 ITFG2Q969R8 447 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 MUL1Q969V5 352 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 NEIL1Q96FI4 390 aaPredicted RBP9.88□□□□□ -0.83
APTX-227ENST00000485479 OR8B2Q96RD0 313 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 NR1H4Q96RI1 486 aaPredicted RBP9.88□□□□□ -0.83
APTX-227ENST00000485479 SSBP3Q9BWW4 388 aaPredicted RBP9.88□□□□□ -0.83
APTX-227ENST00000485479 CNTD2Q9H8S5 307 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 TCF7L1Q9HCS4 588 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 CLN8Q9UBY8 286 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 GSTK1Q9Y2Q3 226 aa9.88□□□□□ -0.83
APTX-227ENST00000485479 B4DSR2 109 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 C22orf46C9J442 243 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 HSPB6O14558 160 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 CD5LO43866 347 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 MRPS14O60783 128 aaKnown RBP9.87□□□□□ -0.83
APTX-227ENST00000485479 HEXAP06865 529 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 UCHL1P09936 223 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 FOSL1P15407 271 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 SRMP19623 302 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 MAPK3P27361 379 aaPredicted RBP9.87□□□□□ -0.83
APTX-227ENST00000485479 PRB3Q04118 309 aaPredicted RBP9.87□□□□□ -0.83
APTX-227ENST00000485479 SMIM21Q3B7S5 101 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 PIGYQ3MUY2 71 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 LRRTM1Q86UE6 522 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 TMEM185AQ8NFB2 350 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 OR4D6Q8NGJ1 314 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 GFI1Q99684 422 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 HES4Q9HCC6 221 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 ING3Q9NXR8 418 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 MIOXQ9UGB7 285 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 ING4Q9UNL4 249 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 AK6Q9Y3D8 172 aaKnown RBP9.87□□□□□ -0.83
APTX-227ENST00000485479 MAB21L2Q9Y586 359 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 HIVEP2P31629 2446 aa9.87□□□□□ -0.83
APTX-227ENST00000485479 NIPBLQ6KC79 2804 aaeCLIP9.87□□□□□ -0.83
APTX-227ENST00000485479 A0A087WXM4 84 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 LOC100506127A0A0U1RQW1 187 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 GPX5O75715 221 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 SERPINA2P20848 420 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 GZMKP49863 264 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 DLX1P56177 255 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 OR10A3P58181 314 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 SCN1BQ07699 218 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 SLC22A6Q4U2R8 563 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 WDR25Q64LD2 544 aaPredicted RBP9.86□□□□□ -0.83
APTX-227ENST00000485479 FAHD2BQ6P2I3 314 aaPredicted RBP9.86□□□□□ -0.83
APTX-227ENST00000485479 NLRC3Q7RTR2 1065 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 FCGR1BQ92637 280 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 FAM46BQ96A09 425 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 TMEM186Q96B77 213 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 FAHD2AQ96GK7 314 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 CHCHD6Q9BRQ6 235 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 CHST6Q9GZX3 395 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 ZNF222Q9UK12 451 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 NSD1Q96L73 2696 aaPredicted RBP9.86□□□□□ -0.83
APTX-227ENST00000485479 NOS1APO75052 506 aaPredicted RBP9.86□□□□□ -0.83
APTX-227ENST00000485479 CYB5AP00167 134 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 AVPP01185 164 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 NDUFB7P17568 137 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 GADD45AP24522 165 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 PTGFRP43088 359 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 CAPZA1P52907 286 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 CLDN12P56749 244 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 LSM3P62310 102 aaKnown RBP9.86□□□□□ -0.83
APTX-227ENST00000485479 SYT6Q5T7P8 510 aaPredicted RBP9.86□□□□□ -0.83
APTX-227ENST00000485479 FAM166AQ6J272 317 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 ZNF788Q6ZQV5 615 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 MKXQ8IYA7 352 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 FAM58AQ8N1B3 248 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 ASCC1Q8N9N2 400 aaKnown RBP9.86□□□□□ -0.83
APTX-227ENST00000485479 H1FXQ92522 213 aaKnown RBP9.86□□□□□ -0.83
APTX-227ENST00000485479 FOXJ3Q9UPW0 622 aa9.86□□□□□ -0.83
APTX-227ENST00000485479 SIRPB1O00241 398 aa9.85□□□□□ -0.83
APTX-227ENST00000485479 ALX3O95076 343 aa9.85□□□□□ -0.83
APTX-227ENST00000485479 HTR3BO95264 441 aa9.85□□□□□ -0.83
APTX-227ENST00000485479 CD36P16671 472 aa9.85□□□□□ -0.83
APTX-227ENST00000485479 PRDX2P32119 198 aa9.85□□□□□ -0.83
APTX-227ENST00000485479 COL10A1Q03692 680 aa9.85□□□□□ -0.83
APTX-227ENST00000485479 RSU1Q15404 277 aa9.85□□□□□ -0.83
APTX-227ENST00000485479 AWAT2Q6E213 333 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms