RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 ZNF281Q9Y2X9 895 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 TRBV23-1A0A0A0MS06 115 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 TRAV40A0A0B4J280 105 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 TRBV5-5A0A0J9YX44 114 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 MYL12BO14950 172 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 TOX4O94842 621 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 CD1AP06126 327 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 CDK1P06493 297 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 SFTPBP07988 381 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 WNT4P56705 351 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 KRTAP24-1Q3LI83 254 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 METTL11BQ5VVY1 283 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 IZUMO2Q6UXV1 221 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 SAXO1Q8IYX7 474 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 NANOGP1Q8N7R0 232 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 ZFAND2BQ8WV99 257 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 CDCA4Q9BXL8 241 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 FAM234AQ9H0X4 552 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 STAB1Q9NY15 2570 aa14.84□□□□□ -0.03
HDAC6-225ENST00000483506 RNF212BA8MTL3 300 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 KDM4BO94953 1096 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 VENTXO95231 258 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 CYB5AP00167 134 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 CD2P06729 351 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 NDUFB7P17568 137 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 POU3F4P49335 361 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 RPS11P62280 158 aaKnown RBP eCLIP14.83□□□□□ -0.04
HDAC6-225ENST00000483506 ARF6P62330 175 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 BDH1Q02338 343 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 DOC2BQ14184 412 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 PDCD1Q15116 288 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 YIF1BQ5BJH7 314 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 C1orf122Q6ZSJ8 110 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 RNF144BQ7Z419 303 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 ZSCAN4Q8NAM6 433 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-225ENST00000483506 TMEM185AQ8NFB2 350 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 GHSRQ92847 366 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 TMEM106AQ96A25 262 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 JMJD8Q96S16 334 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 PCGF1Q9BSM1 259 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 RHOFQ9HBH0 211 aa14.83□□□□□ -0.04
HDAC6-225ENST00000483506 IGKV1-12A0A0C4DH73 117 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 K7N7A8 449 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 ZNF737O75373 536 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 IGKV1D-12P01611 117 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 OCM2P0CE71 109 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 OCMP0CE72 109 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-225ENST00000483506 RAB3AP20336 220 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 BCL3P20749 454 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 NPBWR2P48146 333 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 SOX2P48431 317 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 CEBPDP49716 269 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-225ENST00000483506 ZP1P60852 638 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 SLC35A2P78381 396 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 SRSF2Q01130 221 aaKnown RBP14.82□□□□□ -0.04
HDAC6-225ENST00000483506 ACSM1Q08AH1 577 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 KISS1Q15726 138 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 GPR157Q5UAW9 335 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 BATF2Q8N1L9 274 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 C22orf15Q8WYQ4 148 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 H1FXQ92522 213 aaKnown RBP14.82□□□□□ -0.04
HDAC6-225ENST00000483506 EMG1Q92979 244 aaKnown RBP14.82□□□□□ -0.04
HDAC6-225ENST00000483506 MYDGFQ969H8 173 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 SPACA5Q96QH8 159 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 DUSP21Q9H596 190 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 UNKLQ9H9P5 680 aaKnown RBP14.82□□□□□ -0.04
HDAC6-225ENST00000483506 RBFOX1Q9NWB1 397 aaKnown RBP14.82□□□□□ -0.04
HDAC6-225ENST00000483506 PAK1IP1Q9NWT1 392 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-225ENST00000483506 SCN3BQ9NY72 215 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 ERGIC3Q9Y282 383 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 PCDHGB5Q9Y5G0 923 aa14.82□□□□□ -0.04
HDAC6-225ENST00000483506 CENPVL3A0A0U1RRI6 287 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 M0R1W7 72 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 SPRY1O43609 319 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-225ENST00000483506 GPX5O75715 221 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 TK1P04183 234 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 ALDOBP05062 364 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 CHRM2P08172 466 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 HCKP08631 526 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 IRF3Q14653 427 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 ZNF146Q15072 292 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 Q499Y3 187 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 SPIN3Q5JUX0 258 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 METAP1DQ6UB28 335 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-225ENST00000483506 FIP1L1Q6UN15 594 aaKnown RBP14.81□□□□□ -0.04
HDAC6-225ENST00000483506 PHC2Q8IXK0 858 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 CMTM4Q8IZR5 234 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 BCL6BQ8N143 479 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-225ENST00000483506 FAM58AQ8N1B3 248 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 Q8N7P7 452 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 ZFP41Q8N8Y5 198 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 OR51A2Q8NGJ7 313 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 SPATA3Q8NHX4 192 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 CPNE2Q96FN4 548 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-225ENST00000483506 MND1Q9BWT6 205 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 MS4A7Q9GZW8 240 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-225ENST00000483506 PRDM13Q9H4Q3 707 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 ELL3Q9HB65 397 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-225ENST00000483506 HMG20AQ9NP66 347 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 TAS2R4Q9NYW5 299 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms