RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 BEX5Q5H9J7 111 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 STPG2Q8N412 459 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 PNLDC1Q8NA58 520 aaKnown RBP12.5□□□□□ -0.41
CHD3-211ENST00000481999 SEMA6DQ8NFY4 1073 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 ZNF75AQ96N20 296 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 CHMP1AQ9HD42 196 aaPredicted RBP12.5□□□□□ -0.41
CHD3-211ENST00000481999 MBD2Q9UBB5 411 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 GHRLQ9UBU3 117 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 F5H0A9 414 aaPredicted RBP12.5□□□□□ -0.41
CHD3-211ENST00000481999 MFNGO00587 321 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 FARS2O95363 451 aaKnown RBP12.5□□□□□ -0.41
CHD3-211ENST00000481999 CRHP06850 196 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 ID4P47928 161 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 FAM3AP98173 230 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 MYPOPQ86VE0 399 aaPredicted RBP12.5□□□□□ -0.41
CHD3-211ENST00000481999 TMEM185AQ8NFB2 350 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 OR52H1Q8NGJ2 320 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 ARHGAP5-AS1Q96IT6 56 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 SCGB3A2Q96PL1 93 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 TAAR6Q96RI8 345 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 ARPC5LQ9BPX5 153 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 BARX1Q9HBU1 254 aaPredicted RBP12.5□□□□□ -0.41
CHD3-211ENST00000481999 C13orf42A0A1B0GVH6 325 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 SERPINF1P36955 418 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 SNTB1Q13884 538 aaKnown RBP12.49□□□□□ -0.41
CHD3-211ENST00000481999 PDCD1Q15116 288 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 TMEM17Q86X19 198 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 BHLHE23Q8NDY6 225 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 NMES1Q9C002 83 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 FAM117AQ9C073 453 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 TAS2R3Q9NYW6 316 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 GPR132Q9UNW8 380 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 ACTL6AO96019 429 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 PRF1P14222 555 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 ATF4P18848 351 aaPredicted RBP12.49□□□□□ -0.41
CHD3-211ENST00000481999 RAB1AP62820 205 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 ARFRP1Q13795 201 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 KRTAP27-1Q3LI81 207 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 OR5H2Q8NGV7 314 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 MS4A7Q9GZW8 240 aaPredicted RBP12.49□□□□□ -0.41
CHD3-211ENST00000481999 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
CHD3-211ENST00000481999 PARPBPQ9NWS1 579 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 ARID1AO14497 2285 aa12.49□□□□□ -0.41
CHD3-211ENST00000481999 TRBV6-7A0A0A0MS04 114 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 KLK10O43240 276 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 THBS4P35443 961 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 NPY4RP50391 375 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 MTCP1P56278 107 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 BRICD5Q6PL45 260 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 CCDC36Q8IYA8 594 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 FAM89BQ8N5H3 189 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 TRIB1Q96RU8 372 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 MICU1Q9BPX6 476 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 C5orf66Q9H5L9 145 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.48□□□□□ -0.41
CHD3-211ENST00000481999 A0A0B4J2A0 478 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 hCG_38984A0A1B0GV85 526 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 MTRF1O75570 445 aaKnown RBP12.48□□□□□ -0.41
CHD3-211ENST00000481999 AMY2BP19961 511 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 FPR2P25090 351 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 ALDH3B1P43353 468 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 ZNF273Q14593 569 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 ELP2Q6IA86 826 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 OR51T1Q8NGJ9 327 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 PIGCQ92535 297 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 SHPKQ9UHJ6 478 aa12.48□□□□□ -0.41
CHD3-211ENST00000481999 TEX13DA0A0J9YY54 714 aaPredicted RBP12.47□□□□□ -0.41
CHD3-211ENST00000481999 ZNF724A8MTY0 619 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 LILRA1O75019 489 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 SFT2D2O95562 160 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 APOC3P02656 99 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 TMEM225BP0DP42 221 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 GABRR1P24046 479 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 TAS2R46P59540 309 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 PEG10Q86TG7 708 aaKnown RBP12.47□□□□□ -0.41
CHD3-211ENST00000481999 PP6455Q8WZ26 134 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 LINC00470Q9BZP3 86 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 PIGMQ9H3S5 423 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 RAB18Q9NP72 206 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 PCNX1Q96RV3 2341 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 CELA3BP08861 270 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 OR3A2P47893 321 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 PCBD1P61457 104 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 ESPL1Q14674 2120 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 RNPS1Q15287 305 aaKnown RBP12.47□□□□□ -0.41
CHD3-211ENST00000481999 SPATA46Q5T0L3 261 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 OR5AP2Q8NGF4 316 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 STOML3Q8TAV4 291 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 DCUN1D4Q92564 292 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 TMEM230Q96A57 120 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 HDHD3Q9BSH5 251 aaPredicted RBP12.47□□□□□ -0.41
CHD3-211ENST00000481999 RNF122Q9H9V4 155 aa12.47□□□□□ -0.41
CHD3-211ENST00000481999 TLN1Q9Y490 2541 aaKnown RBP12.47□□□□□ -0.41
CHD3-211ENST00000481999 IGKV1-12A0A0C4DH73 117 aa12.46□□□□□ -0.41
CHD3-211ENST00000481999 LYZL6O75951 148 aa12.46□□□□□ -0.41
CHD3-211ENST00000481999 IGKV1D-12P01611 117 aa12.46□□□□□ -0.41
CHD3-211ENST00000481999 APOC1P02654 83 aa12.46□□□□□ -0.41
CHD3-211ENST00000481999 NAT2P11245 290 aa12.46□□□□□ -0.41
CHD3-211ENST00000481999 PGAM2P15259 253 aa12.46□□□□□ -0.41
CHD3-211ENST00000481999 ARL6IP1Q15041 203 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms