RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 FGGYQ96C11 551 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 MICU1Q9BPX6 476 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 RTL8AQ9BWD3 113 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 TMPRSS13Q9BYE2 586 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 WDR13Q9H1Z4 485 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 ZCCHC4Q9H5U6 513 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 TMEM138Q9NPI0 162 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 ABRACLQ9P1F3 81 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 OPN4Q9UHM6 478 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 PCDHB10Q9UN67 800 aa10.2□□□□□ -0.78
PTPRF-213ENST00000481019 WNK2Q9Y3S1 2297 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 TRAV20A0A0B4J274 112 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 A0A1W2PPK0 400 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 hCG_1807616A0A1W2PRN6 198 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 ZNF732B4DXR9 585 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 LGALS8O00214 317 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 GYPAP02724 150 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 ALDOBP05062 364 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 IRF2P14316 349 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 AMY2BP19961 511 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 PRKACBP22694 351 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 BDKRB2P30411 391 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 PAX2Q02962 417 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 LSAMPQ13449 338 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 FAM189A2Q15884 450 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 CEACAM21Q3KPI0 293 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 CHRFAM7AQ494W8 412 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 DDI2Q5TDH0 399 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 PLCXD3Q63HM9 321 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 FAHD2BQ6P2I3 314 aaPredicted RBP10.19□□□□□ -0.78
PTPRF-213ENST00000481019 C1orf87Q8N0U7 546 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 MUC20Q8N307 709 aaPredicted RBP10.19□□□□□ -0.78
PTPRF-213ENST00000481019 OR51A4Q8NGJ6 313 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 OR13C5Q8NGS8 318 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 FAHD2AQ96GK7 314 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 CEP19Q96LK0 163 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 ZNF488Q96MN9 340 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 CMTM3Q96MX0 182 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 BEX2Q9BXY8 128 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 SLIRPQ9GZT3 109 aaKnown RBP10.19□□□□□ -0.78
PTPRF-213ENST00000481019 NXF2Q9GZY0 626 aaKnown RBP10.19□□□□□ -0.78
PTPRF-213ENST00000481019 SHARPINQ9H0F6 387 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 OR51I2Q9H344 312 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 RNF167Q9H6Y7 350 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 SMURF1Q9HCE7 757 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 ABCB9Q9NP78 766 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 CDC42EP3Q9UKI2 254 aa10.19□□□□□ -0.78
PTPRF-213ENST00000481019 LOC105371242A0A075B767 164 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 OOEPA6NGQ2 149 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 A8MXK9 166 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 AIPO00170 330 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 PIN1P1O15428 100 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 AKR7A2O43488 359 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 FSTL3O95633 263 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 NRASP01111 189 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 RPS2P15880 293 aaKnown RBP10.18□□□□□ -0.78
PTPRF-213ENST00000481019 IGFBP3P17936 291 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-213ENST00000481019 INSL4Q14641 139 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 CNN3Q15417 329 aaKnown RBP10.18□□□□□ -0.78
PTPRF-213ENST00000481019 UBE2V2Q15819 145 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 CLVS2Q5SYC1 327 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 TEX36Q5VZQ5 186 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 SFXN4Q6P4A7 337 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 RNF144BQ7Z419 303 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 BATF2Q8N1L9 274 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 PNLDC1Q8NA58 520 aaKnown RBP10.18□□□□□ -0.78
PTPRF-213ENST00000481019 OR5T2Q8NGG2 359 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 DACT3Q96B18 629 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-213ENST00000481019 SPSB1Q96BD6 273 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 ADAT3Q96EY9 351 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-213ENST00000481019 HIST1H2AAQ96QV6 131 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 UQCC2Q9BRT2 126 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 C6orf62Q9GZU0 229 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-213ENST00000481019 PLGRKTQ9HBL7 147 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 HMG20AQ9NP66 347 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 RABL2AQ9UBK7 228 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-213ENST00000481019 RABL2BQ9UNT1 228 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 SLC7A11Q9UPY5 501 aa10.18□□□□□ -0.78
PTPRF-213ENST00000481019 IGKV1-27A0A075B6S5 117 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 PQLC2LA1A4F0 135 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 TMEM210A6NLX4 147 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 IFITM5A6NNB3 132 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 SRRM5B3KS81 715 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 RGS5O15539 181 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 SULT1B1O43704 296 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 SYNGR1O43759 233 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 MAS1P04201 325 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 CALCBP10092 127 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 ADRA2CP18825 462 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 CFPP27918 469 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 TGFBR1P36897 503 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 CFHR2P36980 270 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 GNG3P63215 75 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 SRSF2Q01130 221 aaKnown RBP10.17□□□□□ -0.78
PTPRF-213ENST00000481019 MZT1Q08AG7 82 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 SPANXN2Q5MJ10 180 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 IDNKQ5T6J7 187 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 FAM27D1Q5T7N8 215 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 WDR25Q64LD2 544 aaPredicted RBP10.17□□□□□ -0.78
PTPRF-213ENST00000481019 DCDC5Q6ZRR9 648 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms