RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 ATF1P18846 271 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 ERVFRD-1P60508 538 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 ZNF91Q05481 1191 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 LHFPL2Q6ZUX7 228 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 LHFPL3Q86UP9 236 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 ENTHD1Q8IYW4 607 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 PNKDQ8N490 385 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 OR5R1Q8NH85 324 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 LGALS12Q96DT0 336 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 MBOAT4Q96T53 435 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 COMMD4Q9H0A8 199 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 SLITRK2Q9H156 845 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 HES4Q9HCC6 221 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 FRRS1LQ9P0K9 344 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 AASSQ9UDR5 926 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 EXOGQ9Y2C4 368 aaKnown RBP12.56□□□□□ -0.4
CDK9-203ENST00000480353 RPL36Q9Y3U8 105 aaKnown RBP12.56□□□□□ -0.4
CDK9-203ENST00000480353 PCDHGB5Q9Y5G0 923 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 MMP24Q9Y5R2 645 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 TENM1Q9UKZ4 2725 aa12.56□□□□□ -0.4
CDK9-203ENST00000480353 CLPSL1A2RUU4 121 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 ISG15P05161 165 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 RPSAP08865 295 aaKnown RBP12.55□□□□□ -0.4
CDK9-203ENST00000480353 DBTP11182 482 aaKnown RBP12.55□□□□□ -0.4
CDK9-203ENST00000480353 GABRR1P24046 479 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 COX7A1P24310 79 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 AZGP1P25311 298 aaKnown RBP12.55□□□□□ -0.4
CDK9-203ENST00000480353 CCR9P51686 369 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 ISL1P61371 349 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 ALKBH1Q13686 389 aaKnown RBP12.55□□□□□ -0.4
CDK9-203ENST00000480353 GALEQ14376 348 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 EDDM3AQ14507 147 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 MIDNQ504T8 468 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 KLHL22Q53GT1 634 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 TMEM200BQ69YZ2 307 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 BRICD5Q6PL45 260 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 DNAAF1Q8NEP3 725 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 PPP1R35Q8TAP8 253 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 SPSB1Q96BD6 273 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 OPALINQ96PE5 141 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 INPP5EQ9NRR6 644 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 MTCH1Q9NZJ7 389 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 VPREB3Q9UKI3 123 aa12.55□□□□□ -0.4
CDK9-203ENST00000480353 K7N7A8 449 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 HAND1O96004 215 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 HCKP08631 526 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 CCDC159P0C7I6 412 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 PRKACAP17612 351 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 PEX2P28328 305 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 GBX2P52951 348 aaPredicted RBP12.54□□□□□ -0.4
CDK9-203ENST00000480353 SNU13P55769 128 aaKnown RBP12.54□□□□□ -0.4
CDK9-203ENST00000480353 ERVK11-1P61568 191 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 RAB40BQ12829 278 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 MRPL28Q13084 256 aaKnown RBP12.54□□□□□ -0.4
CDK9-203ENST00000480353 ZSCAN26Q16670 478 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 FDX2Q6P4F2 183 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 UTS2BQ765I0 119 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 FAM58AQ8N1B3 248 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 TSEN15Q8WW01 171 aaKnown RBP12.54□□□□□ -0.4
CDK9-203ENST00000480353 TNFRSF14Q92956 283 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 ADAT3Q96EY9 351 aaPredicted RBP12.54□□□□□ -0.4
CDK9-203ENST00000480353 PELI1Q96FA3 418 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 SLC29A1Q99808 456 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 AMBNQ9NP70 447 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 FAM118AQ9NWS6 357 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 RNF114Q9Y508 228 aa12.54□□□□□ -0.4
CDK9-203ENST00000480353 IGKV1-27A0A075B6S5 117 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 H3BUX3 64 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 J3QRE1 110 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 CCL3L1P16619 93 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 TGFBR2P37173 567 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 NANOS3P60323 173 aaKnown RBP12.53□□□□□ -0.4
CDK9-203ENST00000480353 ZNF782Q6ZMW2 699 aaPredicted RBP12.53□□□□□ -0.4
CDK9-203ENST00000480353 OR8H2Q8N162 312 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 SYS1Q8N2H4 156 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 OR13C9Q8NGT0 318 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 OR13D1Q8NGV5 346 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 OR5AK2Q8NH90 309 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 RFT1Q96AA3 541 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 SNX22Q96L94 193 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 SSX3Q99909 188 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 ZNF696Q9H7X3 374 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 SMPD3Q9NY59 655 aaPredicted RBP12.53□□□□□ -0.4
CDK9-203ENST00000480353 DHDHQ9UQ10 334 aa12.53□□□□□ -0.4
CDK9-203ENST00000480353 TRBV2A0A0J9YWF9 115 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 hADV38S2A0JD32 116 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 TMEM212A6NML5 194 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 SH2D1BO14796 132 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 MAGEB3O15480 346 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 BCL3P20749 454 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 ZNF273Q14593 569 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 GRK1Q15835 563 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 TAF9Q16594 264 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 LRRC75BQ2VPJ9 315 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 SPIN3Q5JUX0 258 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 TRAPPC6BQ86SZ2 158 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 BEND2Q8NDZ0 799 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 OR5D14Q8NGL3 314 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 RHOXF1Q8NHV9 184 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 HAVCR2Q8TDQ0 301 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms