RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 AMY2BP19961 511 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 GNB2P62879 340 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 FAM27D1Q5T7N8 215 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 WDR25Q64LD2 544 aaPredicted RBP16.43■□□□□ 0.22
LIME1-205ENST00000480139 SATL1Q86VE3 508 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 LURAP1LQ8IV03 231 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 OR5T2Q8NGG2 359 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 MUL1Q969V5 352 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 TMEM186Q96B77 213 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 SDSLQ96GA7 329 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 MED30Q96HR3 178 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 CCL13Q99616 98 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 PPIL3Q9H2H8 161 aaKnown RBP16.43■□□□□ 0.22
LIME1-205ENST00000480139 VCX3AQ9NNX9 186 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 MTORP42345 2549 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 TRDV1A0A1B0GX56 115 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 A8MV72 311 aaPredicted RBP16.42■□□□□ 0.22
LIME1-205ENST00000480139 SIGLEC5O15389 551 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 SRMP19623 302 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 BCL3P20749 454 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 ZFP36P26651 326 aaKnown RBP16.42■□□□□ 0.22
LIME1-205ENST00000480139 PTGFRP43088 359 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 NPBWR2P48146 333 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 BMXP51813 675 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 IL13RA1P78552 427 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 NEDD8Q15843 81 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 FIP1L1Q6UN15 594 aaKnown RBP16.42■□□□□ 0.22
LIME1-205ENST00000480139 LYPD6Q86Y78 171 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 FAM58AQ8N1B3 248 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 TNFAIP8L1Q8WVP5 186 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 EMG1Q92979 244 aaKnown RBP16.42■□□□□ 0.22
LIME1-205ENST00000480139 GAFA1Q96PS6 74 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 SLITRK2Q9H156 845 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 RBFOX1Q9NWB1 397 aaKnown RBP16.42■□□□□ 0.22
LIME1-205ENST00000480139 TMEM160Q9NX00 188 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 IL36GQ9NZH8 169 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 KCNS2Q9ULS6 477 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 DOCK11Q5JSL3 2073 aa16.42■□□□□ 0.22
LIME1-205ENST00000480139 RFPL4AA6NLU0 287 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 RFPL4AL1F8VTS6 287 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 GPR37O15354 613 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 MAS1P04201 325 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 GATA3P23771 443 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 OR3A4PP47883 348 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 LCN2P80188 198 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 SPIN3Q5JUX0 258 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 ELP2Q6IA86 826 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 LRRTM1Q86UE6 522 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 BATF2Q8N1L9 274 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 ZNF561Q8N587 486 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 FAM216BQ8N7L0 139 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 Q8NFD4 153 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 UQCC2Q9BRT2 126 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 LPAR2Q9HBW0 351 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 HMG20AQ9NP66 347 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 YAE1D1Q9NRH1 226 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 HIF1ANQ9NWT6 349 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 OR5V1Q9UGF6 321 aa16.41■□□□□ 0.22
LIME1-205ENST00000480139 DVL1O14640 695 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 PHF1O43189 567 aaPredicted RBP16.4■□□□□ 0.22
LIME1-205ENST00000480139 NDUFB3O43676 98 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 SFTPBP07988 381 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 CD37P11049 281 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 JUNBP17275 347 aaPredicted RBP16.4■□□□□ 0.22
LIME1-205ENST00000480139 ADRA2CP18825 462 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 PRDX2P32119 198 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 MTNR1BP49286 362 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 PAX2Q02962 417 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 ZNF146Q15072 292 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 CD276Q5ZPR3 534 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 C1QL2Q7Z5L3 287 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 JAGN1Q8N5M9 183 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 CD177Q8N6Q3 437 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 DACT3Q96B18 629 aaPredicted RBP16.4■□□□□ 0.22
LIME1-205ENST00000480139 FOXRED1Q96CU9 486 aaPredicted RBP16.4■□□□□ 0.22
LIME1-205ENST00000480139 FAM192AQ9GZU8 254 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 HIVEP2P31629 2446 aa16.4■□□□□ 0.22
LIME1-205ENST00000480139 A0A0G2JMP0 313 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 A0A0X1KG70 313 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 A0A1B0GW55 424 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 ZNF780AO75290 641 aaPredicted RBP16.39■□□□□ 0.21
LIME1-205ENST00000480139 FCN3O75636 299 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 ECDO95905 644 aaPredicted RBP16.39■□□□□ 0.21
LIME1-205ENST00000480139 DUX4L2P0CJ85 424 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 DUX4L3P0CJ86 424 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 DUX4L4P0CJ87 422 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 DUX4L5P0CJ88 424 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 DUX4L6P0CJ89 424 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 DUX4L7P0CJ90 424 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 PRKACAP17612 351 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 CALRP27797 417 aaKnown RBP16.39■□□□□ 0.21
LIME1-205ENST00000480139 FGF9P31371 208 aaPredicted RBP16.39■□□□□ 0.21
LIME1-205ENST00000480139 GABRA2P47869 451 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 CAV3P56539 151 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 FGF12P61328 243 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 DGUOKQ16854 277 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 LRRC10Q5BKY1 277 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 DUX4L9Q6RFH8 374 aaPredicted RBP16.39■□□□□ 0.21
LIME1-205ENST00000480139 OR4M2Q8NGB6 313 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 CNTD2Q9H8S5 307 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms