RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 CFAP46Q8IYW2 2715 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 RBBP9O75884 186 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 MELTFP08582 738 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 HIST1H1DP16402 221 aaKnown RBP9.49□□□□□ -0.89
APTX-223ENST00000479656 DUSP1P28562 367 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 GDNFP39905 211 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 RBM11P57052 281 aaKnown RBP9.49□□□□□ -0.89
APTX-223ENST00000479656 DEFA1P59665 94 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 DEFA3P59666 94 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 HOXA4Q00056 320 aaPredicted RBP9.49□□□□□ -0.89
APTX-223ENST00000479656 BRICD5Q6PL45 260 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 DCDC5Q6ZRR9 648 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 C6orf201Q7Z4U5 140 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 FAM58AQ8N1B3 248 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 ITLN1Q8WWA0 313 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 EMG1Q92979 244 aaKnown RBP9.49□□□□□ -0.89
APTX-223ENST00000479656 MEGF10Q96KG7 1140 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 TMEM204Q9BSN7 226 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 PECRQ9BY49 303 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 TLNRD1Q9H1K6 362 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 OCEL1Q9H607 264 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 C1orf123Q9NWV4 160 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 EPG5Q9HCE0 2579 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 H7C417 338 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 PGA5P0DJD9 388 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 ERVK11-1P61568 191 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 TNFAIP6P98066 277 aaPredicted RBP9.49□□□□□ -0.89
APTX-223ENST00000479656 DAZAP2Q15038 168 aaPredicted RBP9.49□□□□□ -0.89
APTX-223ENST00000479656 MST1LQ2TV78 715 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 ZNF672Q499Z4 452 aaPredicted RBP9.49□□□□□ -0.89
APTX-223ENST00000479656 NKAPLQ5M9Q1 402 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 WDR82Q6UXN9 313 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 TOMM5Q8N4H5 51 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 GPX8Q8TED1 209 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 FAAP24Q9BTP7 215 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 C11orf54Q9H0W9 315 aaPredicted RBP9.49□□□□□ -0.89
APTX-223ENST00000479656 PLEKHJ1Q9NW61 149 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 MTFP1Q9UDX5 166 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 ZDHHC8Q9ULC8 765 aa9.49□□□□□ -0.89
APTX-223ENST00000479656 RBMX2Q9Y388 322 aaKnown RBP9.49□□□□□ -0.89
APTX-223ENST00000479656 hCG_1807616A0A1W2PRN6 198 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 C17orf100A8MU93 164 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 SULT1C2O00338 296 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 MFNGO00587 321 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 WNT9BO14905 357 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 NOS1APO75052 506 aaPredicted RBP9.48□□□□□ -0.89
APTX-223ENST00000479656 OR7C1O76099 320 aaPredicted RBP9.48□□□□□ -0.89
APTX-223ENST00000479656 PTBP3O95758 552 aaKnown RBP9.48□□□□□ -0.89
APTX-223ENST00000479656 ACAA1P09110 424 aaPredicted RBP9.48□□□□□ -0.89
APTX-223ENST00000479656 GSTP1P09211 210 aaKnown RBP9.48□□□□□ -0.89
APTX-223ENST00000479656 PMELP40967 661 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 ASAH1Q13510 395 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 HACD4Q5VWC8 232 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 GDPD3Q7L5L3 318 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 CENPSQ8N2Z9 138 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 POC1AQ8NBT0 407 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 SETD6Q8TBK2 473 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 NUDCD2Q8WVJ2 157 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 NEDD4LQ96PU5 975 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 DHRS9Q9BPW9 319 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 NRIP2Q9BQI9 281 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 IL19Q9UHD0 177 aa9.48□□□□□ -0.89
APTX-223ENST00000479656 B9A039 149 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 M0R233 179 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 SSX4O60224 188 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 SSX5O60225 188 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 NXPH2O95156 264 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 LPLP06858 475 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 IGFBP2P18065 325 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 TNFSF4P23510 183 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 CHATP28329 748 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 GNG2P59768 71 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 CCL8P80075 99 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 ARFRP1Q13795 201 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 NHLRC3Q5JS37 347 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 ATAD3CQ5T2N8 411 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 TRAPPC6BQ86SZ2 158 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 MOGAT3Q86VF5 341 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 Q8IYB0 196 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 CELF2-AS1Q8N7Q2 184 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 FAM222BQ8WU58 562 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 CHPT1Q8WUD6 406 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 WDR13Q9H1Z4 485 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 SCPEP1Q9HB40 452 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 RHOFQ9HBH0 211 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 ZFYVE26Q68DK2 2539 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 A0A1B0GVG6 124 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 LYRM1O43325 122 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 SPNP16150 400 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 FUT3P21217 361 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 GLRA1P23415 457 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 SRSF1Q07955 248 aaKnown RBP eCLIP9.47□□□□□ -0.89
APTX-223ENST00000479656 IKZF1Q13422 519 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 KLF9Q13886 244 aaPredicted RBP9.47□□□□□ -0.89
APTX-223ENST00000479656 OXA1LQ15070 435 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 EFNB3Q15768 340 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 PNLIPRP3Q17RR3 467 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 TRIM16LQ309B1 348 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 PCGF3Q3KNV8 242 aa9.47□□□□□ -0.89
APTX-223ENST00000479656 NRARPQ7Z6K4 114 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms