RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 WIPI2Q9Y4P8 454 aa7.44□□□□□ -1.22
DDX56-211ENST00000479602 TRAV8-7A0A075B6U6 113 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 OOEPA6NGQ2 149 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 SLC17A2O00624 439 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 PDCD5O14737 125 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 BPNT1O95861 308 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 CYB5AP00167 134 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 AVPP01185 164 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 CSN2P05814 226 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 HSMCR30P0CW71 290 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 CD36P16671 472 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 LMO1P25800 156 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 ZNF93P35789 620 aaPredicted RBP7.43□□□□□ -1.22
DDX56-211ENST00000479602 GPR6P46095 362 aaPredicted RBP7.43□□□□□ -1.22
DDX56-211ENST00000479602 HAAOP46952 286 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 KCNJ3P48549 501 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 MTCP1P56278 107 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 MPPED2Q15777 294 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 NEDD8Q15843 81 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 FAM189A2Q15884 450 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 ODF4Q2M2E3 257 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 CEP78Q5JTW2 689 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 GLT8D1Q68CQ7 371 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 STUMQ69YW2 141 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 USP43Q70EL4 1123 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 MOB3CQ70IA8 216 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 CEACAM19Q7Z692 300 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 MOGAT3Q86VF5 341 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 ZFP41Q8N8Y5 198 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 CHST4Q8NCG5 386 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 OR51A2Q8NGJ7 313 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 OR13C5Q8NGS8 318 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 ZNF420Q8TAQ5 688 aaPredicted RBP7.43□□□□□ -1.22
DDX56-211ENST00000479602 DACT3Q96B18 629 aaPredicted RBP7.43□□□□□ -1.22
DDX56-211ENST00000479602 RAB39BQ96DA2 213 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 CEP19Q96LK0 163 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 KCTD7Q96MP8 289 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 TMED9Q9BVK6 235 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 FAM234AQ9H0X4 552 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 NCOR1P1Q9H4R4 102 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 TCF7L1Q9HCS4 588 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 TXNL4BQ9NX01 149 aaKnown RBP7.43□□□□□ -1.22
DDX56-211ENST00000479602 TAS2R4Q9NYW5 299 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 MIOXQ9UGB7 285 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 SCOCQ9UIL1 159 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 SSR3Q9UNL2 185 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 PPIAL4AQ9Y536 164 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 N6AMT1Q9Y5N5 214 aa7.43□□□□□ -1.22
DDX56-211ENST00000479602 TGP01266 2768 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 TMEM89A2RUT3 159 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 AIPO00170 330 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 CDIPTO14735 213 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 IL1AP01583 271 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 IGHV2-5P01817 119 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 GLAP06280 429 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 PPIAL4GP0DN37 164 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 ADRA2CP18825 462 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 GATA3P23771 443 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 MYL9P24844 172 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 PTGFRP43088 359 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 SOX2P48431 317 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 TMBIM6P55061 237 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 CAV3P56539 151 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 FGF12P61328 243 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 ZMYND11Q15326 602 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 CARTPTQ16568 116 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 DGUOKQ16854 277 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 MICBQ29980 383 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 MPV17LQ2QL34 196 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 SPRNQ5BIV9 151 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 DDI2Q5TDH0 399 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 PRAMEF6Q5VXH4 476 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 HAGHLQ6PII5 290 aaPredicted RBP7.42□□□□□ -1.22
DDX56-211ENST00000479602 FIP1L1Q6UN15 594 aaKnown RBP7.42□□□□□ -1.22
DDX56-211ENST00000479602 ACP7Q6ZNF0 438 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 ZNF788Q6ZQV5 615 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 OR2W3Q7Z3T1 314 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.42□□□□□ -1.22
DDX56-211ENST00000479602 OR52N4Q8NGI2 321 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 ANGPTL6Q8NI99 470 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 C8orf46Q8TAG6 207 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 RAB2BQ8WUD1 216 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 LRRC29Q8WV35 223 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 CCL17Q92583 94 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 TMEM186Q96B77 213 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 NUDT16L1Q9BRJ7 211 aaKnown RBP7.42□□□□□ -1.22
DDX56-211ENST00000479602 PPIL3Q9H2H8 161 aaKnown RBP7.42□□□□□ -1.22
DDX56-211ENST00000479602 PATZ1Q9HBE1 687 aaKnown RBP7.42□□□□□ -1.22
DDX56-211ENST00000479602 TMEM165Q9HC07 324 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 HMG20AQ9NP66 347 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 HIF1ANQ9NWT6 349 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 C1orf123Q9NWV4 160 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 MTCH1Q9NZJ7 389 aa7.42□□□□□ -1.22
DDX56-211ENST00000479602 NOTCH1P46531 2555 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 NOTOA8MTQ0 251 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 TRAPPC2LH3BP13 241 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 LDLRAD4O15165 306 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 SIGLEC5O15389 551 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 ECDO95905 644 aaPredicted RBP7.41□□□□□ -1.22
DDX56-211ENST00000479602 FSHBP01225 129 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms