RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 YTHDF1Q9BYJ9 559 aaKnown RBP12.81□□□□□ -0.36
C9orf3-217ENST00000479161 Q9H521 79 aa12.81□□□□□ -0.36
C9orf3-217ENST00000479161 CNTD2Q9H8S5 307 aa12.81□□□□□ -0.36
C9orf3-217ENST00000479161 PAK1IP1Q9NWT1 392 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-217ENST00000479161 LSM2Q9Y333 95 aaKnown RBP12.81□□□□□ -0.36
C9orf3-217ENST00000479161 MAB21L2Q9Y586 359 aa12.81□□□□□ -0.36
C9orf3-217ENST00000479161 KPTNQ9Y664 436 aa12.81□□□□□ -0.36
C9orf3-217ENST00000479161 COL6A5A8TX70 2615 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 RFPL4AA6NLU0 287 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 ZNF879B4DU55 563 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 RFPL4AL1F8VTS6 287 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 MAGEB3O15480 346 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 RGS10O43665 173 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 KDM4BO94953 1096 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 FSTP19883 344 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 BMXP51813 675 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 KISS1Q15726 138 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 DGUOKQ16854 277 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 SPIN3Q5JUX0 258 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 ASPHD2Q6ICH7 369 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 FIP1L1Q6UN15 594 aaKnown RBP12.8□□□□□ -0.36
C9orf3-217ENST00000479161 C9orf139Q6ZV77 190 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 IL17RELQ6ZVW7 336 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 FAM216BQ8N7L0 139 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 Q8NFD4 153 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 PXT1Q8NFP0 134 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 NPRL2Q8WTW4 380 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 TMEM138Q9NPI0 162 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 SNTG1Q9NSN8 517 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 SLC25A10Q9UBX3 287 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-217ENST00000479161 NUP50Q9UKX7 468 aa12.8□□□□□ -0.36
C9orf3-217ENST00000479161 TRBV5-7A0A0A0MS05 114 aa12.79□□□□□ -0.36
C9orf3-217ENST00000479161 CHRM2P08172 466 aa12.79□□□□□ -0.36
C9orf3-217ENST00000479161 MMP9P14780 707 aa12.79□□□□□ -0.36
C9orf3-217ENST00000479161 IGFBP3P17936 291 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-217ENST00000479161 CELP19835 753 aa12.79□□□□□ -0.36
C9orf3-217ENST00000479161 FPR2P25090 351 aa12.79□□□□□ -0.36
C9orf3-217ENST00000479161 ZP1P60852 638 aa12.79□□□□□ -0.36
C9orf3-217ENST00000479161 ELP2Q6IA86 826 aa12.79□□□□□ -0.36
C9orf3-217ENST00000479161 METAP1DQ6UB28 335 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-217ENST00000479161 ASCL4Q6XD76 172 aa12.79□□□□□ -0.36
C9orf3-217ENST00000479161 CD177Q8N6Q3 437 aa12.79□□□□□ -0.36
C9orf3-217ENST00000479161 ST8SIA4Q92187 359 aa12.79□□□□□ -0.36
C9orf3-217ENST00000479161 UNKLQ9H9P5 680 aaKnown RBP12.79□□□□□ -0.36
C9orf3-217ENST00000479161 FOXJ3Q9UPW0 622 aa12.79□□□□□ -0.36
C9orf3-217ENST00000479161 K7N7A8 449 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 PLATP00750 562 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 EPHA1P21709 976 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 LMO1P25800 156 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 MAPK3P27361 379 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-217ENST00000479161 GABRA2P47869 451 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 PPP3R1P63098 170 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 PDCD1Q15116 288 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 ARMCX4Q5H9R4 360 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 UNQ9370/PRO34162Q6UXP9 181 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 FAM58AQ8N1B3 248 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 ZNRF1Q8ND25 227 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 OR5D13Q8NGL4 314 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 CNBD2Q96M20 576 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 ZNF488Q96MN9 340 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 WDFY2Q96P53 400 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 SIRPDQ9H106 197 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 HMG20AQ9NP66 347 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 CKLFQ9UBR5 152 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 GLS2Q9UI32 602 aa12.78□□□□□ -0.36
C9orf3-217ENST00000479161 A0A1B0GW55 424 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 F8VVB4 439 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 F8VWA3 439 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 M0R1W7 72 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 ZNF737O75373 536 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 HCKP08631 526 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 DUX4L2P0CJ85 424 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 DUX4L3P0CJ86 424 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 DUX4L4P0CJ87 422 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 DUX4L5P0CJ88 424 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 DUX4L6P0CJ89 424 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 DUX4L7P0CJ90 424 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 SOX2P48431 317 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 GABARAPL2P60520 117 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 GMFBP60983 142 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 IKZF1Q13422 519 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 TPBGQ13641 420 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 TBCEQ15813 527 aaPredicted RBP12.77□□□□□ -0.37
C9orf3-217ENST00000479161 KLF17Q5JT82 389 aaPredicted RBP12.77□□□□□ -0.37
C9orf3-217ENST00000479161 METTL11BQ5VVY1 283 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 DUX4L9Q6RFH8 374 aaPredicted RBP12.77□□□□□ -0.37
C9orf3-217ENST00000479161 CMTM4Q8IZR5 234 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 ZFAND2BQ8WV99 257 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 SLAMF9Q96A28 289 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 SNX22Q96L94 193 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 DUX4Q9UBX2 424 aa12.77□□□□□ -0.37
C9orf3-217ENST00000479161 FBN3Q75N90 2809 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 IGKV1-12A0A0C4DH73 117 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 A0A1W2PPH5 198 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 MEGF11A6BM72 1044 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 TCF21O43680 179 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 SC5DO75845 299 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 TOX4O94842 621 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 IGKV1D-12P01611 117 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 TK1P04183 234 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms