RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 NTN3O00634 580 aaPredicted RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 CCSO14618 274 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 BET1O15155 118 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 SOCS1O15524 211 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 RRP8O43159 456 aaKnown RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 CBR3O75828 277 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 SFT2D2O95562 160 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 CER1O95813 267 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 WDPCPO95876 746 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 OPN1LWP04000 364 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 RLN2P04090 185 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 CFIP05156 583 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 CRHP06850 196 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 UMODP07911 640 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 CCL3P10147 92 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 LIPCP11150 499 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 SLC2A1P11166 492 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 AKR1C4P17516 323 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 CPT2P23786 658 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 PSMB6P28072 239 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 SRD5A2P31213 254 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 OTX1P32242 354 aaPredicted RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 FOLR3P41439 243 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 PTGFRP43088 359 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 OR3A2P47893 321 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 SLC6A9P48067 706 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 STARP49675 285 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 ATP1B3P54709 279 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 TMEM50BP56557 158 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 MLF1P58340 268 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 MRPS34P82930 218 aaKnown RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 ZFP36L1Q07352 338 aaKnown RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 RAB35Q15286 201 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 CNN3Q15417 329 aaKnown RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 SURF2Q15527 256 aaPredicted RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 KISS1Q15726 138 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 MICBQ29980 383 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 C3orf36Q3SXR2 165 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 SLC22A6Q4U2R8 563 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 TMEM128Q5BJH2 165 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 PLAC9Q5JTB6 97 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 RAET1LQ5VY80 246 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 TCEAL6Q6IPX3 200 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 JMJD6Q6NYC1 403 aaPredicted RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 MOB3CQ70IA8 216 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 KCTD9Q7L273 389 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 PEG10Q86TG7 708 aaKnown RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 LHFPL1Q86WI0 220 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 RPS19BP1Q86WX3 136 aaKnown RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 C20orf196Q8IYI0 205 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 STPG2Q8N412 459 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 PRR18Q8N4B5 295 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 TMEM156Q8N614 296 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 ADAD2Q8NCV1 583 aaKnown RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 TMEM104Q8NE00 496 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 OR52H1Q8NGJ2 320 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 OR51T1Q8NGJ9 327 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 OR2Y1Q8NGV0 311 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 MARCH1Q8TCQ1 289 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 CASTOR1Q8WTX7 329 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 KCNE4Q8WWG9 221 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 EMG1Q92979 244 aaKnown RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 TCEAL3Q969E4 200 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 NABP1Q96AH0 204 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 CPNE2Q96FN4 548 aaPredicted RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF799Q96GE5 643 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 ARHGAP5-AS1Q96IT6 56 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 SGCZQ96LD1 299 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 LINC00052Q96N35 136 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 SPACA5Q96QH8 159 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 S100A13Q99584 98 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 FOXB1Q99853 325 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 PIGQQ9BRB3 760 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 NICN1Q9BSH3 213 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 SOX7Q9BT81 388 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF471Q9BX82 626 aaPredicted RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 PECRQ9BY49 303 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 ULBP2Q9BZM5 246 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 CHST5Q9GZS9 411 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 BANF2Q9H503 90 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 CHMP1AQ9HD42 196 aaPredicted RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 SH2D2AQ9NP31 389 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 RAB18Q9NP72 206 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 HPF1Q9NWY4 346 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF319Q9P2F9 582 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 PRSS50Q9UI38 385 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF230Q9UIE0 474 aaPredicted RBP4.3□□□□□ -1.72
SF3B6-202ENST00000478050 GPR132Q9UNW8 380 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 HS3ST3B1Q9Y662 390 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 WDFY3Q8IZQ1 3526 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 MED12Q93074 2177 aa4.3□□□□□ -1.72
SF3B6-202ENST00000478050 LOC100509620A0A075B734 347 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 IGKV1-9A0A0C4DH69 117 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 A0A0J9YW62 118 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 TEX13DA0A0J9YY54 714 aaPredicted RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 LOC105371267A0A1B0GV96 52 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 LNP1A1A4G5 178 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 OR5H15A6NDH6 313 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 C5orf51A6NDU8 294 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 FAM25EA8MYX2 175 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms