RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 LRRC10Q5BKY1 277 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 ZNF841Q6ZN19 808 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 CEACAM19Q7Z692 300 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 OR5T2Q8NGG2 359 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 OR52N4Q8NGI2 321 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 EMG1Q92979 244 aaKnown RBP10.93□□□□□ -0.66
TOP3A-205ENST00000477508 SLAMF9Q96A28 289 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 RFT1Q96AA3 541 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 SDSLQ96GA7 329 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 DMRTB1Q96MA1 342 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 ZNF488Q96MN9 340 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 SPACA5Q96QH8 159 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 CCL13Q99616 98 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 SLITRK2Q9H156 845 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 SMURF1Q9HCE7 757 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 TCF7L1Q9HCS4 588 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 PCDHB16Q9NRJ7 776 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 SNTG1Q9NSN8 517 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 CDC42EP3Q9UKI2 254 aa10.93□□□□□ -0.66
TOP3A-205ENST00000477508 SONP18583 2426 aaKnown RBP10.93□□□□□ -0.66
TOP3A-205ENST00000477508 IGKV1D-17A0A075B6S4 117 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 TRAV8-7A0A075B6U6 113 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 LOC105371242A0A075B767 164 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 A0A1W2PPK0 400 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 RFPL4AA6NLU0 287 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 KIAA1324LA8MWY0 1029 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-205ENST00000477508 RFPL4AL1F8VTS6 287 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 CCRL2O00421 344 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 DVL1O14640 695 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 SIGLEC5O15389 551 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 PIN1P1O15428 100 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 PHF1O43189 567 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-205ENST00000477508 RGS9O75916 674 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-205ENST00000477508 KDM4BO94953 1096 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 LIPFP07098 398 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 UCHL1P09936 223 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 ZFP36P26651 326 aaKnown RBP10.92□□□□□ -0.66
TOP3A-205ENST00000477508 PSMB9P28065 219 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 PTGFRP43088 359 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 RANBP1P43487 201 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 GABRA2P47869 451 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 ZP1P60852 638 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 SEC61A1P61619 476 aaKnown RBP10.92□□□□□ -0.66
TOP3A-205ENST00000477508 SPIN3Q5JUX0 258 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 DCAF12L2Q5VW00 463 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 BTNL3Q6UXE8 466 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 Q71RC1 249 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-205ENST00000477508 FAM58AQ8N1B3 248 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 ZNF561Q8N587 486 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 TSPAN14Q8NG11 270 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 TNFAIP8L1Q8WVP5 186 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 RAB40AQ8WXH6 277 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 TMEM203Q969S6 136 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 FOXRED1Q96CU9 486 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-205ENST00000477508 SEH1LQ96EE3 360 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 S100A13Q99584 98 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 ZNF696Q9H7X3 374 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 NDUFB11Q9NX14 153 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 CTSZQ9UBR2 303 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 ZNF222Q9UK12 451 aa10.92□□□□□ -0.66
TOP3A-205ENST00000477508 SF3B6Q9Y3B4 125 aaKnown RBP10.92□□□□□ -0.66
TOP3A-205ENST00000477508 GABRPO00591 440 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 SPRY1O43609 319 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-205ENST00000477508 ENSAO43768 121 aaKnown RBP10.91□□□□□ -0.66
TOP3A-205ENST00000477508 ANGPTL7O43827 346 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 ZNF780AO75290 641 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-205ENST00000477508 CHRM2P08172 466 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 SRMP19623 302 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 AMY2BP19961 511 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 BCL3P20749 454 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 NPBWR2P48146 333 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 MTNR1BP49286 362 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 CAV3P56539 151 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 RPS25P62851 125 aaKnown RBP10.91□□□□□ -0.66
TOP3A-205ENST00000477508 GPR176Q14439 515 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 ZNF146Q15072 292 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 CR1LQ2VPA4 569 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 SYT6Q5T7P8 510 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-205ENST00000477508 ELP2Q6IA86 826 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 FAHD2BQ6P2I3 314 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-205ENST00000477508 ASCL4Q6XD76 172 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 OR5D18Q8NGL1 313 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 FAHD2AQ96GK7 314 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 GAFA1Q96PS6 74 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 NR1H4Q96RI1 486 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-205ENST00000477508 UQCC2Q9BRT2 126 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 FAM234AQ9H0X4 552 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 HMG20AQ9NP66 347 aa10.91□□□□□ -0.66
TOP3A-205ENST00000477508 KIR2DS1A0A191URI9 304 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 F8VVB4 439 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 F8VWA3 439 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 MAS1P04201 325 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 PRKACAP17612 351 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 PSMD7P51665 324 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 FGF12P61328 243 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 RSU1Q15404 277 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 SSX1Q16384 188 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 CRIP3Q6Q6R5 217 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 CD200R1LQ6Q8B3 271 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 TMEM91Q6ZNR0 172 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms