RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SLAMF9Q96A28 289 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 DUX3Q96PT4 197 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 PRR25Q96S07 402 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 CDRT15Q96T59 188 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 TEAD3Q99594 435 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 NIPSNAP1Q9BPW8 284 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 ELAC2Q9BQ52 826 aaKnown RBP5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 NRIP2Q9BQI9 281 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 MCRIP2Q9BUT9 160 aaKnown RBP5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 TMEM133Q9H2Q1 129 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 LIN7BQ9HAP6 207 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 FAM206AQ9NX38 181 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 ING3Q9NXR8 418 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 VNN3Q9NY84 501 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 ZMAT5Q9UDW3 170 aaKnown RBP5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 MINOS1-NBL1R4GNA1 71 aa5.33□□□□□ -1.56
RTFDC1-206ENST00000477485 PQLC2LA1A4F0 135 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 SERPINE3A8MV23 424 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 LEUTXA8MZ59 168 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 LOC110117498-PIK3R3F6TDL0 507 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 C3orf84H3BNL1 204 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 GNGT2O14610 69 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 TOR1AO14656 332 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 PRODHO43272 600 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 OR2F2O95006 317 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 LY86O95711 162 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 NHLRC4P0CG21 123 aaPredicted RBP5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 CALCBP10092 127 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 ATP6V1B1P15313 513 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 ATP6V1B2P21281 511 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 PEX2P28328 305 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 MNDAP41218 407 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 OR3A4PP47883 348 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 THBS3P49746 956 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 RIDAP52758 137 aaKnown RBP5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 APOFQ13790 326 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 HES1Q14469 280 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 GINS1Q14691 196 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 KPNB1Q14974 876 aaKnown RBP5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 PRAMEF5Q5TYX0 476 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 SLX4IPQ5VYV7 408 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 OR2T5Q6IEZ7 315 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 PLEKHG7Q6ZR37 379 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 C18orf65Q6ZTR6 163 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 TCF23Q7RTU1 214 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 EGFL6Q8IUX8 553 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 DEFB107AQ8IZN7 70 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 PGAM4Q8N0Y7 254 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 OSR2Q8N2R0 312 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 OR2T29Q8NH02 315 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 GIPC3Q8TF64 312 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 CEP19Q96LK0 163 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 RBM14Q96PK6 669 aaKnown RBP5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 TEX12Q9BXU0 123 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 DGCR6LQ9BY27 220 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 CADM1Q9BY67 442 aaKnown RBP5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 ZNF556Q9HAH1 456 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 PALMDQ9NP74 551 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 DPM3Q9P2X0 92 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 LINC00527Q9UJ94 153 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 SLC7A11Q9UPY5 501 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 LINC00312Q9Y6C7 94 aa5.32□□□□□ -1.56
RTFDC1-206ENST00000477485 DNAH3Q8TD57 4116 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 TRGV10A0A0A0MS01 117 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 ARRDC5A6NEK1 342 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 ACOD1A6NK06 481 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 FAM90A22PA8MWA6 464 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 F8VVB4 439 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 F8VWA3 439 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 H0YHG0 523 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 SIRPB1O00241 398 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 DLGAP1O14490 977 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 NOS1APO75052 506 aaPredicted RBP5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 MMP23AO75900 390 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 SASH3O75995 380 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 HAND1O96004 215 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 CYB5AP00167 134 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 IGHA1P01876 353 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 TTRP02766 147 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 PRKACAP17612 351 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 ALOX5APP20292 161 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 CDK2P24941 298 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 NFYBP25208 207 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 DUSP1P28562 367 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 PRDX6P30041 224 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 CEACAM3P40198 252 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 ECI1P42126 302 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 POU3F4P49335 361 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 LUMP51884 338 aaPredicted RBP5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 HMGA2P52926 109 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 RPL23AP62750 156 aaKnown RBP5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 MEF2CQ06413 473 aaPredicted RBP5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 SCN1BQ07699 218 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 IL24Q13007 206 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 FAM98BQ52LJ0 330 aaKnown RBP5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 HSP90B2PQ58FF3 399 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 SLC35D3Q5M8T2 416 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 LCN1P1Q5VSP4 162 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 OR52W1Q6IF63 320 aa5.31□□□□□ -1.56
RTFDC1-206ENST00000477485 C16orf89Q6UX73 402 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms