RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 EMG1Q92979 244 aaKnown RBP8.41□□□□□ -1.06
CCM2-208ENST00000476594 FGGYQ96C11 551 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 PELI1Q96FA3 418 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 OPALINQ96PE5 141 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 SLC29A1Q99808 456 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 HEXA-AS1Q9H8Q6 139 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 UNKLQ9H9P5 680 aaKnown RBP8.41□□□□□ -1.06
CCM2-208ENST00000476594 HES4Q9HCC6 221 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 MRPS18AQ9NVS2 196 aaKnown RBP8.41□□□□□ -1.06
CCM2-208ENST00000476594 ERVK13-1Q9NX77 482 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 FRRS1LQ9P0K9 344 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.41□□□□□ -1.06
CCM2-208ENST00000476594 DHDHQ9UQ10 334 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 MAB21L2Q9Y586 359 aa8.41□□□□□ -1.06
CCM2-208ENST00000476594 TRBV2A0A0J9YWF9 115 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 FUOMA2VDF0 154 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 NPFFO15130 113 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 MT-ND2P03891 347 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 TK1P04183 234 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 MELTFP08582 738 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 SELLP14151 372 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 PEX2P28328 305 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 LGALS4P56470 323 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 ERVFRD-1P60508 538 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 ERVK11-1P61568 191 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 ELF3P78545 371 aaPredicted RBP8.4□□□□□ -1.06
CCM2-208ENST00000476594 RCN1Q15293 331 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 CCDC58Q4VC31 144 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 SPIN3Q5JUX0 258 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 SHISA2Q6UWI4 295 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 GDPGP1Q6ZNW5 385 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 SLC25A26Q70HW3 274 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 LDLRAD3Q86YD5 345 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 SERPINA12Q8IW75 414 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 OR4F5Q8NH21 305 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 OR5R1Q8NH85 324 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 SGMS2Q8NHU3 365 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 DYRK2Q92630 601 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 SLAMF9Q96A28 289 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 ZNF488Q96MN9 340 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 JAM3Q9BX67 310 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 BEX1Q9HBH7 125 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 AMBNQ9NP70 447 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 EXOSC1Q9Y3B2 195 aaKnown RBP8.4□□□□□ -1.06
CCM2-208ENST00000476594 HSPE1-MOB4S4R3N1 261 aa8.4□□□□□ -1.06
CCM2-208ENST00000476594 MDFIC2A0A1B0GVS7 189 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 MEIOCA2RUB1 952 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 OR4C45A6NMZ5 311 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 K7N7A8 449 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 FCN3O75636 299 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 ALX3O95076 343 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 HCKP08631 526 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 BMXP51813 675 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 EDDM3BP56851 147 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 NANOS3P60323 173 aaKnown RBP8.39□□□□□ -1.07
CCM2-208ENST00000476594 LRRC36Q1X8D7 754 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 MIDNQ504T8 468 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 ZNF691Q5VV52 312 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 RPL22L1Q6P5R6 122 aaKnown RBP8.39□□□□□ -1.07
CCM2-208ENST00000476594 PDZD9Q8IXQ8 264 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 RDH10Q8IZV5 341 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 FAM58AQ8N1B3 248 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 FGFRL1Q8N441 504 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 CD177Q8N6Q3 437 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 DTX3Q8N9I9 347 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 OR52I1Q8NGK6 324 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 OR13C9Q8NGT0 318 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 ADAT3Q96EY9 351 aaPredicted RBP8.39□□□□□ -1.07
CCM2-208ENST00000476594 SNX22Q96L94 193 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 ZCCHC4Q9H5U6 513 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 SEBOXQ9HB31 216 aaPredicted RBP8.39□□□□□ -1.07
CCM2-208ENST00000476594 FGF20Q9NP95 211 aaPredicted RBP8.39□□□□□ -1.07
CCM2-208ENST00000476594 TNFRSF19Q9NS68 423 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 MYRFQ9Y2G1 1151 aa8.39□□□□□ -1.07
CCM2-208ENST00000476594 A0A0U1RQK1 487 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 hADV38S2A0JD32 116 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 RNASEK-C17orf49H0YIS7 233 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 SH2D1BO14796 132 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 SULT1B1O43704 296 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 ANGPTL7O43827 346 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 HAND1O96004 215 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 RBP4P02753 201 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 PRKACAP17612 351 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 RAB3AP20336 220 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 GABRR1P24046 479 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 COL10A1Q03692 680 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 MEF2CQ06413 473 aaPredicted RBP8.38□□□□□ -1.07
CCM2-208ENST00000476594 PDZK1IP1Q13113 114 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 SAXO1Q8IYX7 474 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 C8orf59Q8N0T1 100 aaPredicted RBP8.38□□□□□ -1.07
CCM2-208ENST00000476594 OR8H2Q8N162 312 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 Q8N7P7 452 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 OR13D1Q8NGV5 346 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 GPR148Q8TDV2 347 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 C1orf147Q96MC9 270 aaPredicted RBP8.38□□□□□ -1.07
CCM2-208ENST00000476594 GPER1Q99527 375 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 ZNF747Q9BV97 191 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 ELL3Q9HB65 397 aaPredicted RBP8.38□□□□□ -1.07
CCM2-208ENST00000476594 RAB18Q9NP72 206 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 EXOSC4Q9NPD3 245 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms