RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, human

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5A-208	ENST00000476544	CEP19	Q96LK0	163 aa		11.22	□□□□□ -0.61
RAB5A-208	ENST00000476544	DMRTB1	Q96MA1	342 aa		11.22	□□□□□ -0.61
RAB5A-208	ENST00000476544	ZCCHC4	Q9H5U6	513 aa		11.22	□□□□□ -0.61
RAB5A-208	ENST00000476544	PLEKHA1	Q9HB21	404 aa		11.22	□□□□□ -0.61
RAB5A-208	ENST00000476544	SEBOX	Q9HB31	216 aa	Predicted RBP	11.22	□□□□□ -0.61
RAB5A-208	ENST00000476544	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	11.22	□□□□□ -0.61
RAB5A-208	ENST00000476544	CNOT2	Q9NZN8	540 aa	Known RBP	11.22	□□□□□ -0.61
RAB5A-208	ENST00000476544	POLDIP2	Q9Y2S7	368 aa		11.22	□□□□□ -0.61
RAB5A-208	ENST00000476544	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.22	□□□□□ -0.61
RAB5A-208	ENST00000476544	TRAV40	A0A0B4J280	105 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	EFCAB10	A6NFE3	127 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	KNG1	P01042	644 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	NDUFB7	P17568	137 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	BCL3	P20749	454 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	PRKACB	P22694	351 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	DUSP1	P28562	367 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	SOX2	P48431	317 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	ATP1B3	P54709	279 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	ZP1	P60852	638 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	DEFB112	Q30KQ8	113 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	TMPRSS11A	Q6ZMR5	421 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	C17orf107	Q6ZR85	190 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	NANOGP1	Q8N7R0	232 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	OR52N4	Q8NGI2	321 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	OR13C5	Q8NGS8	318 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	ZNF418	Q8TF45	676 aa	Predicted RBP	11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	AJUBA	Q96IF1	538 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	PGLYRP3	Q96LB9	341 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	DUX5	Q96PT3	197 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	C19orf12	Q9NSK7	152 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	RBFOX1	Q9NWB1	397 aa	Known RBP	11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	KPTN	Q9Y664	436 aa		11.21	□□□□□ -0.61
RAB5A-208	ENST00000476544	TRBV5-5	A0A0J9YX44	114 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	RNASEK-C17orf49	H0YIS7	233 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544		K7N7A8	449 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	TK1	P04183	234 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	CCDC159	P0C7I6	412 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	ZNF20	P17024	532 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	COL10A1	Q03692	680 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	CNN3	Q15417	329 aa	Known RBP	11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	SMIM21	Q3B7S5	101 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	C1orf122	Q6ZSJ8	110 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	AHSA2	Q719I0	299 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	VMO1	Q7Z5L0	202 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	SERPINA12	Q8IW75	414 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	PDZD9	Q8IXQ8	264 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	BPIFB2	Q8N4F0	458 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	ZNF561	Q8N587	486 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	OR4M1	Q8NGD0	313 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	OR5D14	Q8NGL3	314 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	H1FX	Q92522	213 aa	Known RBP	11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	TAF15	Q92804	592 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	LHX4	Q969G2	390 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	SPSB1	Q96BD6	273 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	OPALIN	Q96PE5	141 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	MYCBP	Q99417	103 aa	Predicted RBP	11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	NKX3-1	Q99801	234 aa	Predicted RBP	11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	SUCNR1	Q9BXA5	334 aa		11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.2	□□□□□ -0.62
RAB5A-208	ENST00000476544	IGHV1-69D	A0A0B4J2H0	117 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	IRGM	A1A4Y4	181 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	PTGES3L	E9PB15	166 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	PIN1P1	O15428	100 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	PSPN	O60542	156 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	KDM4B	O94953	1096 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	IGHV1-69	P01742	117 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	IGFBP3	P17936	291 aa	Predicted RBP	11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	DLX6	P56179	175 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	UBA52	P62987	128 aa	Known RBP	11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	IRF3	Q14653	427 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	ZNF146	Q15072	292 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	SLC9A3R2	Q15599	337 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	KISS1	Q15726	138 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	RNLS	Q5VYX0	342 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	ASCL4	Q6XD76	172 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	LHFPL2	Q6ZUX7	228 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	PNKD	Q8N490	385 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	KIR3DL3	Q8N743	410 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	TMEM185A	Q8NFB2	350 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	OR5D18	Q8NGL1	313 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	GPR148	Q8TDV2	347 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	FAM216A	Q8WUB2	273 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	ZFAND2B	Q8WV99	257 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	DUSP21	Q9H596	190 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	UNKL	Q9H9P5	680 aa	Known RBP	11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	HMG20A	Q9NP66	347 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	SIRT7	Q9NRC8	400 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	OR14J1	Q9UGF5	321 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	ZNF281	Q9Y2X9	895 aa		11.19	□□□□□ -0.62
RAB5A-208	ENST00000476544	TRBV5-7	A0A0A0MS05	114 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	NKX6-3	A6NJ46	265 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	SULT1B1	O43704	296 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	GPX5	O75715	221 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	CDK1	P06493	297 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	CHRM2	P08172	466 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	MYF6	P23409	242 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	PRTN3	P24158	256 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	POU3F4	P49335	361 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	GP2	P55259	537 aa	Known RBP	11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	KLRD1	Q13241	179 aa		11.18	□□□□□ -0.62

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