RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 RENP00797 406 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 KNG1P01042 644 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 TTRP02766 147 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 PRH1P02810 166 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 SPARCP09486 303 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 OR4A8P0C604 315 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 IGFBP4P22692 258 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 RPL12P30050 165 aaKnown RBP7.35□□□□□ -1.23
VAPB-205ENST00000476395 AKT2P31751 481 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 LBHQ53QV2 105 aaPredicted RBP7.35□□□□□ -1.23
VAPB-205ENST00000476395 Q6ZS52 159 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 LINC00346Q8IVM7 164 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 ASB10Q8WXI3 467 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 PTX4Q96A99 478 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 SLC25A44Q96H78 314 aaPredicted RBP7.35□□□□□ -1.23
VAPB-205ENST00000476395 SLC46A1Q96NT5 459 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 BCO1Q9HAY6 547 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 ZNF107Q9UII5 783 aaPredicted RBP7.35□□□□□ -1.23
VAPB-205ENST00000476395 FLVCR1Q9Y5Y0 555 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 TMEM14AQ9Y6G1 99 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 EML6Q6ZMW3 1958 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 A0A087WZY1 265 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 NXPH2O95156 264 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 HLA-DQA2P01906 255 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 IFNA6P05013 189 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 PAX1P15863 534 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 LTBRP36941 435 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 CLDN6P56747 220 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 MRPL49Q13405 166 aaKnown RBP7.35□□□□□ -1.23
VAPB-205ENST00000476395 TRA2AQ13595 282 aaKnown RBP eCLIP7.35□□□□□ -1.233e-6■□□□□ 11.2
VAPB-205ENST00000476395 PRSS8Q16651 343 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 TM4SF20Q53R12 229 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 AKR1C8PQ5T2L2 129 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 TUSC5Q8IXB3 177 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 POC1AQ8NBT0 407 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 SLC25A31Q9H0C2 315 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 PNO1Q9NRX1 252 aaKnown RBP7.35□□□□□ -1.23
VAPB-205ENST00000476395 B3GAT1Q9P2W7 334 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 DHDHQ9UQ10 334 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 FOXI3A8MTJ6 420 aaPredicted RBP7.34□□□□□ -1.23
VAPB-205ENST00000476395 H3BQ15 152 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 ITGB1BP1O14713 200 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 IGHEP01854 428 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 NHLH2Q02577 135 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 IL15RAQ13261 267 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 RHEBQ15382 184 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 PHF19Q5T6S3 580 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 SLC18B1Q6NT16 456 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 LYPD6BQ8NI32 183 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 REEP6Q96HR9 211 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 SPXQ9BT56 116 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 OR8D2Q9GZM6 311 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 SLC35B3Q9H1N7 401 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 SEPSECSQ9HD40 501 aaKnown RBP7.34□□□□□ -1.23
VAPB-205ENST00000476395 CKLFQ9UBR5 152 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 TMED7-TICAM2A0A0A6YYA0 188 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 CBY3A6NI87 242 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 C9J4A7 227 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 TMEM238C9JI98 176 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 RPL36A-HNRNPH2H7BZ11 118 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 EIF1AYO14602 144 aaKnown RBP7.34□□□□□ -1.23
VAPB-205ENST00000476395 MBPP02686 304 aaPredicted RBP7.34□□□□□ -1.23
VAPB-205ENST00000476395 PLA2G5P39877 138 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 EIF1AXP47813 144 aaKnown RBP7.34□□□□□ -1.23
VAPB-205ENST00000476395 CX3CR1P49238 355 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 TLE1Q04724 770 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 CLEC12BQ2HXU8 276 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 SOHLH1Q5JUK2 328 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 C1orf140Q5VVS0 124 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 AGBL5Q8NDL9 886 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 FAM213BQ8TBF2 198 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 NDUFAF3Q9BU61 184 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 CNTNAP3Q9BZ76 1288 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 WWTR1Q9GZV5 400 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 PADI1Q9ULC6 663 aa7.34□□□□□ -1.23
VAPB-205ENST00000476395 A0A0A6YYH2 397 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 A6NJ64 397 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 CEACAM18A8MTB9 384 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 TMEM14DPA8MWL7 114 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 K7EPK0 472 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 P2RY10O00398 339 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 S100A7P31151 101 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 SELENOVP59797 346 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 DLK1P80370 383 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 TMEM182Q6ZP80 229 aaPredicted RBP7.34□□□□□ -1.24
VAPB-205ENST00000476395 COX15Q7KZN9 410 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 FAM71E2Q8N5Q1 922 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 OR4K15Q8NH41 348 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 PRR7Q8TB68 274 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 NPRL2Q8WTW4 380 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 RNF138Q8WVD3 245 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 RNF133Q8WVZ7 376 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 RTBDNQ9BSG5 229 aaPredicted RBP7.34□□□□□ -1.24
VAPB-205ENST00000476395 OR52A1Q9UKL2 312 aa7.34□□□□□ -1.24
VAPB-205ENST00000476395 ASXL3Q9C0F0 2248 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 C2orf72A6NCS6 295 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 MT-ATP6P00846 226 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 CST4P01036 141 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 LYL1P12980 280 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 APOBEC1P41238 236 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms