RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 FAM122BQ7Z309 247 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 LDLRAD3Q86YD5 345 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 THNSL2Q86YJ6 484 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 RRNAD1Q96FB5 475 aaKnown RBP4.38□□□□□ -1.71
CCDC39-204ENST00000476379 ZC3HAV1LQ96H79 300 aaKnown RBP4.38□□□□□ -1.71
CCDC39-204ENST00000476379 RHOVQ96L33 236 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 HES7Q9BYE0 225 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 ZCCHC4Q9H5U6 513 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 B3GALT5Q9Y2C3 310 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 ETV7Q9Y603 341 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 CEBPZOSA8MTT3 80 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 DVL1O14640 695 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 PHYHO14832 338 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 TOX4O94842 621 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 CLDN1O95832 211 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 MMP7P09237 267 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF816Q0VGE8 651 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-204ENST00000476379 FHL5Q5TD97 284 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 WDFY1Q8IWB7 410 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 ZSCAN4Q8NAM6 433 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-204ENST00000476379 OR5M8Q8NGP6 311 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 OR1N1Q8NGS0 311 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 ASB17Q8WXJ9 295 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 ABHD14AQ9BUJ0 271 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 LAT2Q9GZY6 243 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 GCM1Q9NP62 436 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF275Q9NSD4 429 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-204ENST00000476379 IL36RNQ9UBH0 155 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 ATPIF1Q9UII2 106 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 IGSF10Q6WRI0 2623 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 H0Y8G0 127 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 RNASEK-C17orf49H0YIS7 233 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 CYB5BO43169 146 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 SULT1B1O43704 296 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 KRASP01116 189 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 IFNA2P01563 188 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 APELAP0DMC3 54 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF32P17041 273 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 MECP2P51608 486 aaKnown RBP4.38□□□□□ -1.71
CCDC39-204ENST00000476379 SHBQ15464 509 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 PLAC9Q5JTB6 97 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 GGNBP1Q5YKI7 109 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF880Q6PDB4 577 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 OR10V1Q8NGI7 309 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 SCGB1C1Q8TD33 95 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 GPBAR1Q8TDU6 330 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 CPNE4Q96A23 557 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-204ENST00000476379 RARRES2Q99969 163 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 PILRBQ9UKJ0 227 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 LIPGQ9Y5X9 500 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 IGKV1D-8A0A087WSZ0 117 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 C19orf67A6NJJ6 358 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 MRPL33O75394 65 aaKnown RBP4.38□□□□□ -1.71
CCDC39-204ENST00000476379 DDAH2O95865 285 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 METTL15P1P0C7V9 234 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 EGR1P18146 543 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 GABRA2P47869 451 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 RPL23AP62750 156 aaKnown RBP4.38□□□□□ -1.71
CCDC39-204ENST00000476379 MALLQ13021 153 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 UNC119Q13432 240 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 EIF2S3LQ2VIR3 472 aaKnown RBP4.38□□□□□ -1.71
CCDC39-204ENST00000476379 SNAI3Q3KNW1 292 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 AWAT1Q58HT5 328 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 RGS7BPQ6MZT1 257 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-204ENST00000476379 SLC23A3Q6PIS1 610 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 RPS19BP1Q86WX3 136 aaKnown RBP4.38□□□□□ -1.71
CCDC39-204ENST00000476379 EXD3Q8N9H8 876 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 SLC30A7Q8NEW0 376 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 OR9K2Q8NGE7 335 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 OR5AP2Q8NGF4 316 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 OR5L2Q8NGL0 311 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 SPTSSAQ969W0 71 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 CCDC74BQ96LY2 380 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 AK3Q9UIJ7 227 aa4.38□□□□□ -1.71
CCDC39-204ENST00000476379 TRAV14DV4A0A0A6YYC5 116 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 A0A1W2PR77 199 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 TMEM218A2RU14 115 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 LINC00862A6NCI5 91 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 A6NIZ1 184 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 DHRS7CA6NNS2 312 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 TBX19O60806 448 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 CRHP06850 196 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 ASAH2BP0C7U1 165 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 PET100P0DJ07 73 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 HIST1H1DP16402 221 aaKnown RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 G0S2P27469 103 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 LPAR6P43657 344 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 CEBPDP49716 269 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 FABP6P51161 128 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 RAB2AP61019 212 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 RAP1BP61224 184 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 RAP1AP62834 184 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 EFNB1P98172 346 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 EGR3Q06889 387 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 ECH1Q13011 328 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 MPV17LQ2QL34 196 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF658BQ4V348 819 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 NHLRC3Q5JS37 347 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 OR2T2Q6IF00 324 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 BTNL3Q6UXE8 466 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms