RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 RTN4RL2Q86UN3 420 aa16.46■□□□□ 0.23
SYF2-204ENST00000476231 COQ8AQ8NI60 647 aa16.46■□□□□ 0.23
SYF2-204ENST00000476231 C5orf66Q9H5L9 145 aa16.46■□□□□ 0.23
SYF2-204ENST00000476231 RAB18Q9NP72 206 aa16.46■□□□□ 0.23
SYF2-204ENST00000476231 OSGIN2Q9Y236 505 aa16.46■□□□□ 0.23
SYF2-204ENST00000476231 B8ZZF3 427 aa16.46■□□□□ 0.22
SYF2-204ENST00000476231 RRP8O43159 456 aaKnown RBP16.46■□□□□ 0.22
SYF2-204ENST00000476231 ZP3P21754 424 aa16.46■□□□□ 0.22
SYF2-204ENST00000476231 CNN3Q15417 329 aaKnown RBP16.46■□□□□ 0.22
SYF2-204ENST00000476231 TMEM42Q69YG0 159 aa16.46■□□□□ 0.22
SYF2-204ENST00000476231 ZNF585AQ6P3V2 769 aa16.46■□□□□ 0.22
SYF2-204ENST00000476231 CCDC36Q8IYA8 594 aa16.46■□□□□ 0.22
SYF2-204ENST00000476231 CNEP1R1Q8N9A8 125 aa16.46■□□□□ 0.22
SYF2-204ENST00000476231 OR5AP2Q8NGF4 316 aa16.46■□□□□ 0.22
SYF2-204ENST00000476231 APOBEC3DQ96AK3 386 aaPredicted RBP16.46■□□□□ 0.22
SYF2-204ENST00000476231 ABHD17AQ96GS6 310 aa16.46■□□□□ 0.22
SYF2-204ENST00000476231 DNTTIP1Q9H147 329 aa16.46■□□□□ 0.22
SYF2-204ENST00000476231 EDARQ9UNE0 448 aa16.46■□□□□ 0.22
SYF2-204ENST00000476231 RNF222A6NCQ9 220 aa16.45■□□□□ 0.22
SYF2-204ENST00000476231 KRBOX1C9JBD0 128 aa16.45■□□□□ 0.22
SYF2-204ENST00000476231 SERPINA5P05154 406 aa16.45■□□□□ 0.22
SYF2-204ENST00000476231 CRHP06850 196 aa16.45■□□□□ 0.22
SYF2-204ENST00000476231 CCNOP22674 350 aa16.45■□□□□ 0.22
SYF2-204ENST00000476231 IGHV1-2P23083 117 aa16.45■□□□□ 0.22
SYF2-204ENST00000476231 SNU13P55769 128 aaKnown RBP16.45■□□□□ 0.22
SYF2-204ENST00000476231 NPRL2Q8WTW4 380 aa16.45■□□□□ 0.22
SYF2-204ENST00000476231 TMEM230Q96A57 120 aa16.45■□□□□ 0.22
SYF2-204ENST00000476231 SEC22AQ96IW7 307 aa16.45■□□□□ 0.22
SYF2-204ENST00000476231 Q96M66 194 aa16.45■□□□□ 0.22
SYF2-204ENST00000476231 GPR173Q9NS66 373 aa16.45■□□□□ 0.22
SYF2-204ENST00000476231 HSF4Q9ULV5 492 aa16.45■□□□□ 0.22
SYF2-204ENST00000476231 A8MXK9 166 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 CCSO14618 274 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 PSMB6P28072 239 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 APLNRP35414 380 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 ATP1B3P54709 279 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 OVCH2Q7RTZ1 564 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 CASTOR1Q8WTX7 329 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 EMG1Q92979 244 aaKnown RBP16.44■□□□□ 0.22
SYF2-204ENST00000476231 POM121Q96HA1 1249 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 VRK1Q99986 396 aaPredicted RBP16.44■□□□□ 0.22
SYF2-204ENST00000476231 METTL9Q9H1A3 318 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 PPA2Q9H2U2 334 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 RASL12Q9NYN1 266 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 MBD3L4A6NDZ8 208 aaPredicted RBP16.44■□□□□ 0.22
SYF2-204ENST00000476231 MBD3L3A6NE82 208 aaPredicted RBP16.44■□□□□ 0.22
SYF2-204ENST00000476231 MBD3L5A6NJ08 208 aaPredicted RBP16.44■□□□□ 0.22
SYF2-204ENST00000476231 FIGNL2A6NMB9 653 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 FGF2P09038 288 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 SERPINA2P20848 420 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 MALLQ13021 153 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 TBR1Q16650 682 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 KRTCAP3Q53RY4 240 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 FAM209AQ5JX71 171 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 AADACL3Q5VUY0 350 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 LHFPL2Q6ZUX7 228 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 INO80EQ8NBZ0 244 aaPredicted RBP16.44■□□□□ 0.22
SYF2-204ENST00000476231 CSNK2A3Q8NEV1 391 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 OR5D18Q8NGL1 313 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 OR13G1Q8NGZ3 307 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 OR1S1Q8NH92 325 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 MBD3L2Q8NHZ7 208 aaPredicted RBP16.44■□□□□ 0.22
SYF2-204ENST00000476231 PIGTQ969N2 578 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 TECTBQ96PL2 329 aa16.44■□□□□ 0.22
SYF2-204ENST00000476231 RTBDNQ9BSG5 229 aaPredicted RBP16.44■□□□□ 0.22
SYF2-204ENST00000476231 ZNF816-ZNF321PA0A0X1KG74 233 aa16.43■□□□□ 0.22
SYF2-204ENST00000476231 NRASP01111 189 aa16.43■□□□□ 0.22
SYF2-204ENST00000476231 CCL2P13500 99 aa16.43■□□□□ 0.22
SYF2-204ENST00000476231 HOXB1P14653 301 aaPredicted RBP16.43■□□□□ 0.22
SYF2-204ENST00000476231 PTGER4P35408 488 aa16.43■□□□□ 0.22
SYF2-204ENST00000476231 MTCP1P56278 107 aa16.43■□□□□ 0.22
SYF2-204ENST00000476231 KCTD9Q7L273 389 aa16.43■□□□□ 0.22
SYF2-204ENST00000476231 MDP1Q86V88 176 aa16.43■□□□□ 0.22
SYF2-204ENST00000476231 BOD1Q96IK1 185 aa16.43■□□□□ 0.22
SYF2-204ENST00000476231 CXorf58Q96LI9 332 aa16.43■□□□□ 0.22
SYF2-204ENST00000476231 ST6GALNAC5Q9BVH7 336 aa16.43■□□□□ 0.22
SYF2-204ENST00000476231 REPIN1Q9BWE0 567 aaKnown RBP16.43■□□□□ 0.22
SYF2-204ENST00000476231 NARFLQ9H6Q4 476 aa16.43■□□□□ 0.22
SYF2-204ENST00000476231 CHMP1AQ9HD42 196 aaPredicted RBP16.43■□□□□ 0.22
SYF2-204ENST00000476231 PLSCR4Q9NRQ2 329 aa16.43■□□□□ 0.22
SYF2-204ENST00000476231 WDR1O75083 606 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 SPDEFO95238 335 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 RLN2P04090 185 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 NPY4RP50391 375 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 DMRTC1Q5HYR2 192 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 VWA1Q6PCB0 445 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 FAM180AQ6UWF9 173 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 CLEC18BQ6UXF7 455 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 MRPS24Q96EL2 167 aaKnown RBP16.42■□□□□ 0.22
SYF2-204ENST00000476231 ZNF75AQ96N20 296 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 OPA3Q9H6K4 179 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 TP53TG5Q9Y2B4 290 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 LYL1P12980 280 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 COX5AP20674 150 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 SERPINF1P36955 418 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 UBE2NP61088 152 aaKnown RBP16.42■□□□□ 0.22
SYF2-204ENST00000476231 GABRA6Q16445 453 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 CHRFAM7AQ494W8 412 aa16.42■□□□□ 0.22
SYF2-204ENST00000476231 C1orf162Q8NEQ5 155 aaPredicted RBP16.42■□□□□ 0.22
SYF2-204ENST00000476231 DECR2Q9NUI1 292 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms