RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 MIR7-3HGQ8N6C7 128 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 ZNF645Q8N7E2 425 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 OR52E5Q8NH55 327 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 PHF10Q8WUB8 498 aaKnown RBP2.59□□□□□ -1.99
PTCD3-211ENST00000476215 ING5Q8WYH8 240 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 RPEQ96AT9 228 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 UQCC2Q9BRT2 126 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 ELOVL6Q9H5J4 265 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 EXO5Q9H790 373 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 VPS37BQ9H9H4 285 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 PARVGQ9HBI0 331 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 RRAGDQ9NQL2 400 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-211ENST00000476215 PDP1Q9P0J1 537 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-211ENST00000476215 LAMA5O15230 3695 aa2.59□□□□□ -2
PTCD3-211ENST00000476215 ASPMQ8IZT6 3477 aa2.59□□□□□ -2
PTCD3-211ENST00000476215 ACACBO00763 2458 aa2.59□□□□□ -2
PTCD3-211ENST00000476215 IGHV3-49A0A0A0MS15 119 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 SERPINB7O75635 380 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 FCN3O75636 299 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 CYB5R3P00387 301 aaPredicted RBP2.58□□□□□ -2
PTCD3-211ENST00000476215 IFNW1P05000 195 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 OR4Q2P0C623 313 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 TCP1P17987 556 aaKnown RBP2.58□□□□□ -2
PTCD3-211ENST00000476215 SYT1P21579 422 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 MYL9P24844 172 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 HTR1DP28221 377 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 CD70P32970 193 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 POLR2IP36954 125 aaKnown RBP2.58□□□□□ -2
PTCD3-211ENST00000476215 TUFMP49411 452 aaKnown RBP2.58□□□□□ -2
PTCD3-211ENST00000476215 PRLHRP49683 370 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 ACOT2P49753 483 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 SERPINB8P50452 374 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 FABP6P51161 128 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 ITIH4Q14624 930 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 FAM173BQ6P4H8 233 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 RTL4Q6ZR62 310 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 VKORC1L1Q8N0U8 176 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 UBAC2Q8NBM4 344 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 OR5T1Q8NG75 326 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 SGTBQ96EQ0 304 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 CALN1Q9BXU9 219 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 ASB7Q9H672 318 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 HEBP1Q9NRV9 189 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 SDK1Q7Z5N4 2213 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 CNOT1A5YKK6 2376 aaKnown RBP2.58□□□□□ -2
PTCD3-211ENST00000476215 DSPP15924 2871 aaKnown RBP2.58□□□□□ -2
PTCD3-211ENST00000476215 TRIP11Q15643 1979 aa2.58□□□□□ -2
PTCD3-211ENST00000476215 ZZEF1O43149 2961 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 PLXNA3P51805 1871 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 MYBPHLA2RUH7 354 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 VPS37CA5D8V6 355 aaPredicted RBP2.57□□□□□ -2
PTCD3-211ENST00000476215 BTNL10A8MVZ5 291 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 BCKDKO14874 412 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 PLIN3O60664 434 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 GLAP06280 429 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 RNASE2P10153 161 aaKnown RBP2.57□□□□□ -2
PTCD3-211ENST00000476215 HMGA1P17096 107 aaKnown RBP2.57□□□□□ -2
PTCD3-211ENST00000476215 GALP22466 123 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 RPS15AP62244 130 aaKnown RBP2.57□□□□□ -2
PTCD3-211ENST00000476215 TFAMQ00059 246 aaKnown RBP2.57□□□□□ -2
PTCD3-211ENST00000476215 IL18Q14116 193 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 STUMQ69YW2 141 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 MDP1Q86V88 176 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 TMEM86AQ8N2M4 240 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 PDCL2Q8N4E4 241 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 ST20-AS1Q8NBB2 130 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 C19orf18Q8NEA5 215 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 BPIFCQ8NFQ6 507 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 OR4M1Q8NGD0 313 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 C2orf15Q8WU43 125 aaKnown RBP2.57□□□□□ -2
PTCD3-211ENST00000476215 GHSRQ92847 366 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 ACBD6Q9BR61 282 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 ZSCAN16Q9H4T2 348 aaPredicted RBP2.57□□□□□ -2
PTCD3-211ENST00000476215 C8orf33Q9H7E9 229 aaPredicted RBP2.57□□□□□ -2
PTCD3-211ENST00000476215 AUNIPQ9H7T9 357 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 MYEF2Q9P2K5 600 aaKnown RBP2.57□□□□□ -2
PTCD3-211ENST00000476215 TBC1D24Q9ULP9 559 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 NDRG2Q9UN36 371 aaKnown RBP2.57□□□□□ -2
PTCD3-211ENST00000476215 C2orf16Q68DN1 1984 aa2.57□□□□□ -2
PTCD3-211ENST00000476215 ANKRD11Q6UB99 2663 aaPredicted RBP2.56□□□□□ -2
PTCD3-211ENST00000476215 KMT2EQ8IZD2 1858 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 VWA8A3KMH1 1905 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 ZFHX4Q86UP3 3567 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 SERTM2A0A1B0GWG4 89 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 GOLGA8IPA6NC78 632 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 ZNF233A6NK53 670 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 GOLGA8JA6NMD2 632 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 ANKRD65E5RJM6 399 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 TRDMT1O14717 391 aaKnown RBP2.56□□□□□ -2
PTCD3-211ENST00000476215 TAAR5O14804 337 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 RAD1O60671 282 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 KRT16P08779 473 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 UBCP0CG48 685 aaKnown RBP2.56□□□□□ -2
PTCD3-211ENST00000476215 OR8G3PP0DMU2 310 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 GABRR2P28476 465 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 HOXA6P31267 233 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 BMI1P35226 326 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 PPICP45877 212 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 SNRPFP62306 86 aaKnown RBP2.56□□□□□ -2
PTCD3-211ENST00000476215 RPL10AP62906 217 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms