RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 C1orf162Q8NEQ5 155 aaPredicted RBP8.43□□□□□ -1.06
USP39-214ENST00000474572 OR5L1Q8NGL2 311 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 OR6K3Q8NGY3 331 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 OR51F2Q8NH61 342 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 OR5P3Q8WZ94 311 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 WNT2BQ93097 391 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 SARAFQ96BY9 339 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 FAAP24Q9BTP7 215 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 PAPOLGQ9BWT3 736 aaKnown RBP8.43□□□□□ -1.06
USP39-214ENST00000474572 NMES1Q9C002 83 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 RAB18Q9NP72 206 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 ZNF701Q9NV72 531 aaPredicted RBP8.43□□□□□ -1.06
USP39-214ENST00000474572 FAM86C1Q9NVL1 165 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 TNFSF18Q9UNG2 199 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 ST3GAL6Q9Y274 331 aa8.43□□□□□ -1.06
USP39-214ENST00000474572 FXYD6-FXYD2A0A087WZ82 144 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 TRBV6-7A0A0A0MS04 114 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 SDCBPO00560 298 aaPredicted RBP8.42□□□□□ -1.06
USP39-214ENST00000474572 CCSO14618 274 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 LYL1P12980 280 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 AKR1C4P17516 323 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 FUT3P21217 361 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 CCNOP22674 350 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 PTGER4P35408 488 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 NPBWR2P48146 333 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 TBC1D28Q2M2D7 210 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 DEFB109BQ30KR1 87 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 INO80CQ6PI98 192 aaPredicted RBP8.42□□□□□ -1.06
USP39-214ENST00000474572 DHRS11Q6UWP2 260 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 CLEC18BQ6UXF7 455 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 C3P1Q6ZMU1 363 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 Q6ZPA2 131 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 LINC00596Q86U02 117 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 MKXQ8IYA7 352 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 KCNRGQ8N5I3 272 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 SLC30A7Q8NEW0 376 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 MAFIPQ8WZ33 124 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 PKIBQ9C010 78 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 FXYD6Q9H0Q3 95 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 RHOFQ9HBH0 211 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 TMEM165Q9HC07 324 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 DNAJC13O75165 2243 aa8.42□□□□□ -1.06
USP39-214ENST00000474572 KNTC1P50748 2209 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 A0A0D9SG52 128 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 RNF222A6NCQ9 220 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 AHRRA9YTQ3 701 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 ZNF732B4DXR9 585 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 SMPD2O60906 423 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 RP2O75695 350 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 WISP2O76076 250 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 OR2F2O95006 317 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 CRHP06850 196 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 BCL3P20749 454 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 VAMP1P23763 118 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 SERPINF1P36955 418 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 EIF2S3P41091 472 aaKnown RBP8.41□□□□□ -1.06
USP39-214ENST00000474572 KIR2DL2P43627 348 aaPredicted RBP8.41□□□□□ -1.06
USP39-214ENST00000474572 NOVA1P51513 510 aaKnown RBP8.41□□□□□ -1.06
USP39-214ENST00000474572 UCP3P55916 312 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 ARPC4P59998 168 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 TGFBR3Q03167 851 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 IL24Q13007 206 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 IL15RAQ13261 267 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 OR2F1Q13607 317 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 IL13RA2Q14627 380 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 ANKRD55Q3KP44 614 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 ACSF3Q4G176 576 aaPredicted RBP8.41□□□□□ -1.06
USP39-214ENST00000474572 OR2A2Q6IF42 318 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 GSG1LQ6UXU4 331 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 C9orf106Q8NAJ2 232 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 COQ8AQ8NI60 647 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 CASTOR1Q8WTX7 329 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 PPP1R1CQ8WVI7 109 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 MARVELD3Q96A59 401 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 MARS2Q96GW9 593 aaKnown RBP8.41□□□□□ -1.06
USP39-214ENST00000474572 TRIB1Q96RU8 372 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 ZNF2Q9BSG1 426 aaPredicted RBP8.41□□□□□ -1.06
USP39-214ENST00000474572 GSX2Q9BZM3 304 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 MFFQ9GZY8 342 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 IRF2BPLQ9H1B7 796 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 LIME1Q9H400 295 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 PLK3Q9H4B4 646 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 ZNF286AQ9HBT8 521 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 C12orf4Q9NQ89 552 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 NECAP2Q9NVZ3 263 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 MED9Q9NWA0 146 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 MTCH1Q9NZJ7 389 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 COMMD9Q9P000 198 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 KIF25Q9UIL4 384 aa8.41□□□□□ -1.06
USP39-214ENST00000474572 RTTNQ86VV8 2226 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 TRBV6-6A0A0A6YYG2 114 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 MBD3L4A6NDZ8 208 aaPredicted RBP8.4□□□□□ -1.06
USP39-214ENST00000474572 MBD3L3A6NE82 208 aaPredicted RBP8.4□□□□□ -1.06
USP39-214ENST00000474572 CRYM-AS1A6NIL9 109 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 MBD3L5A6NJ08 208 aaPredicted RBP8.4□□□□□ -1.06
USP39-214ENST00000474572 ANKRD30BLA7E2S9 258 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 LEUTXA8MZ59 168 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 ZNHIT1O43257 154 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 NOS1APO75052 506 aaPredicted RBP8.4□□□□□ -1.06
USP39-214ENST00000474572 NAPSAO96009 420 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms