RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, human

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-215	ENST00000474539	REL	Q04864	619 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	PJVK	Q0ZLH3	352 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	SLC25A53	Q5H9E4	307 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	ZNF774	Q6NX45	483 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	C19orf35	Q6ZS72	473 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	CELF2-AS1	Q8N7Q2	184 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	OR10A7	Q8NGE5	316 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	LGALS14	Q8TCE9	139 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	FLYWCH2	Q96CP2	140 aa	Known RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	TMEM208	Q9BTX3	173 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	OR2J1	Q9GZK6	312 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	ZNF275	Q9NSD4	429 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	FLVCR1	Q9Y5Y0	555 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	IGLV3-32	A0A0A0MS00	114 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539		K7N7A8	449 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	CLN5	O75503	358 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	MT-ND4	P03905	459 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	RPS4Y1	P22090	263 aa	Known RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	HTR1D	P28221	377 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	PCBP3	P57721	371 aa	Known RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	IAH1	Q2TAA2	248 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	C10orf128	Q5T292	105 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	CFAP77	Q6ZQR2	320 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	MDP1	Q86V88	176 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	MOGAT3	Q86VF5	341 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	C17orf82	Q86X59	251 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	LYSMD2	Q8IV50	215 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	FUNDC1	Q8IVP5	155 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	SKA3	Q8IX90	412 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	COMMD1	Q8N668	190 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	FDCSP	Q8NFU4	85 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	OR1L8	Q8NGR8	309 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	TNFRSF14	Q92956	283 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	FAHD2A	Q96GK7	314 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	ARPC5L	Q9BPX5	153 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	YAE1D1	Q9NRH1	226 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	TXNL4B	Q9NX01	149 aa	Known RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	CYB5R1	Q9UHQ9	305 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	RALY	Q9UKM9	306 aa	Known RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	RALGAPA2	Q2PPJ7	1873 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	TRAV6	A0A075B6T7	132 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	SNRPGP15	A8MWD9	76 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	TRDC	B7Z8K6	153 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	UMAD1	C9J7I0	102 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539		H3BSH0	61 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539		J3QLI3	93 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	RAB29	O14966	203 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	ADAP1	O75689	374 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	ONECUT2	O95948	504 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	KIR3DL2	P43630	455 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	EVX1	P49640	407 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	CDK5	Q00535	292 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	KIAA0040	Q15053	153 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	ZNF468	Q5VIY5	522 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	FAM166A	Q6J272	317 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	TBPL2	Q6SJ96	375 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	LYG1	Q8N1E2	194 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	OR51H1	Q8NH63	302 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	OR9G1	Q8NH87	305 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	RNF133	Q8WVZ7	376 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	FYTTD1	Q96QD9	318 aa	Known RBP	4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	TSPAN32	Q96QS1	320 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	SMCO4	Q9NRQ5	59 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	ACOXL	Q9NUZ1	547 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	FOXJ2	Q9P0K8	574 aa		4.06	□□□□□ -1.76
CCNL1-215	ENST00000474539	SRCAP	Q6ZRS2	3230 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	HSD17B6	O14756	317 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	TMPRSS2	O15393	492 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	AKR7A2	O43488	359 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	XRCC3	O43542	346 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	S1PR2	O95136	353 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	SNRNP70	P08621	437 aa	Known RBP	4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	CA5A	P35218	305 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	GDNF	P39905	211 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	CNN1	P51911	297 aa	Known RBP	4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	RPL31	P62899	125 aa	Known RBP	4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	KISS1	Q15726	138 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	CEBPE	Q15744	281 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	CEACAM21	Q3KPI0	293 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	ACSF3	Q4G176	576 aa	Predicted RBP	4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	ZNF343	Q6P1L6	599 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	IGFL3	Q6UXB1	125 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	SLC16A12	Q6ZSM3	486 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	AMER3	Q8N944	861 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	OR2T10	Q8NGZ9	312 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	IMMP1L	Q96LU5	166 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	MCRIP2	Q9BUT9	160 aa	Known RBP	4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	PRSS22	Q9GZN4	317 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	MFF	Q9GZY8	342 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	LYRM2	Q9NU23	88 aa	Predicted RBP	4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	TAS2R3	Q9NYW6	316 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	BOLA1	Q9Y3E2	137 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	RNF114	Q9Y508	228 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	KLF2	Q9Y5W3	355 aa	Predicted RBP	4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	LTBP1	Q14766	1721 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	HELT	A6NFD8	242 aa		4.05	□□□□□ -1.76
CCNL1-215	ENST00000474539	IFITM5	A6NNB3	132 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 2041.9 ms