RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TMEM225BP0DP42 221 aa16.27■□□□□ 0.19
ECHDC1-214ENST00000474289 GALNSP34059 522 aa16.27■□□□□ 0.19
ECHDC1-214ENST00000474289 APLNRP35414 380 aa16.27■□□□□ 0.19
ECHDC1-214ENST00000474289 HSF1Q00613 529 aa16.27■□□□□ 0.19
ECHDC1-214ENST00000474289 LRTM2Q8N967 370 aa16.27■□□□□ 0.19
ECHDC1-214ENST00000474289 ANXA10Q9UJ72 324 aa16.27■□□□□ 0.19
ECHDC1-214ENST00000474289 FAM230AA0A1W2PPH8 454 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 A0A1W2PQD3 144 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 FAM24AA6NFZ4 105 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 SFTPDP35247 375 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 ABCA11PQ4W5N1 156 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 ZNF542PQ5EBM4 170 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 LIAT1Q6ZQX7 453 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 TMEM183AQ8IXX5 376 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 CLDND2Q8NHS1 167 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 RNASEH2CQ8TDP1 164 aaKnown RBP16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 TMEM171Q8WVE6 324 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 DDA1Q9BW61 102 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 CRISPLD2Q9H0B8 497 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 OR14J1Q9UGF5 321 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 STMND1H3BQB6 276 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 AMBPP02760 352 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 POU2F2P09086 479 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 HOXA6P31267 233 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 PPM1FP49593 454 aaPredicted RBP16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 RND2P52198 227 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 RNF4P78317 190 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 GNMTQ14749 295 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 OR2C3Q8N628 320 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 RPP25Q9BUL9 199 aaKnown RBP16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 GPR87Q9BY21 358 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 PPP1R14DQ9NXH3 145 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 SPEGQ15772 3267 aa16.26■□□□□ 0.19
ECHDC1-214ENST00000474289 SHANK1Q9Y566 2161 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 B4DEV8 164 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 ZNF728P0DKX0 622 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 MDKP21741 143 aaPredicted RBP16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 TNFRSF9Q07011 255 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 ZP4Q12836 540 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 PHLDA2Q53GA4 152 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 P4HA3Q7Z4N8 544 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 NAXEQ8NCW5 288 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 OR5L1Q8NGL2 311 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 MSI2Q96DH6 328 aaKnown RBP16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 ACTR3CQ9C0K3 210 aaPredicted RBP16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 NXT1Q9UKK6 140 aaKnown RBP16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 POLR1DQ9Y2S0 133 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 MYO15AQ9UKN7 3530 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 A0A1W2PQF6 199 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 IGSF23A1L1A6 192 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 TSPAN2O60636 221 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 IGKV3-11P04433 115 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 SFTPCP11686 197 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 OMGP23515 440 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 RPL23AP62750 156 aaKnown RBP16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 H1FNTQ75WM6 255 aaPredicted RBP16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 TM2D1Q9BX74 207 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 PLEKHJ1Q9NW61 149 aa16.25■□□□□ 0.19
ECHDC1-214ENST00000474289 TGOLN2O43493 480 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 CA11O75493 328 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 CCL1P22362 96 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 GABRR1P24046 479 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 G0S2P27469 103 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 ALDH3B1P43353 468 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 BIDP55957 195 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 FXYD4P59646 89 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 TLE3Q04726 772 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 PLCXD2Q0VAA5 305 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 SLC38A9Q8NBW4 561 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 OR4D5Q8NGN0 318 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 TSLPQ969D9 159 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 ELL3Q9HB65 397 aaPredicted RBP16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 SLC2A9Q9NRM0 540 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 OBP2AQ9NY56 170 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 SLC7A11Q9UPY5 501 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 B3GALT1Q9Y5Z6 326 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 CLDN34H7C241 214 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 PITX3O75364 302 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 CD200P41217 278 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 RRADP55042 308 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 ARMC6Q6NXE6 501 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 FAM57BQ71RH2 274 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 ZNF721Q8TF20 911 aa16.24■□□□□ 0.19
ECHDC1-214ENST00000474289 PNLIPP16233 465 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 SLC10A1Q14973 349 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 ARL6IP1Q15041 203 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 PPA1Q15181 289 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 DOK3Q7L591 496 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 HAS2Q92819 552 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 LIN37Q96GY3 246 aaPredicted RBP16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 NUDT22Q9BRQ3 303 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 C11orf1Q9H5F2 150 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 CDH20Q9HBT6 801 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 TMEM242Q9NWH2 141 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 F5P12259 2224 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 TRBV24-1A0A075B6N3 115 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 A0A1B0GU03 582 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 ZNF850A8MQ14 1090 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 E9PLN8 166 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 TNFRSF10CO14798 259 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms