RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 KLRD1Q13241 179 aa9.16□□□□□ -0.94
CKS1B-206ENST00000474215 FIP1L1Q6UN15 594 aaKnown RBP9.16□□□□□ -0.94
CKS1B-206ENST00000474215 MKXQ8IYA7 352 aa9.16□□□□□ -0.94
CKS1B-206ENST00000474215 OR52I1Q8NGK6 324 aa9.16□□□□□ -0.94
CKS1B-206ENST00000474215 OR13C3Q8NGS6 347 aa9.16□□□□□ -0.94
CKS1B-206ENST00000474215 OR10AC1Q8NH08 325 aa9.16□□□□□ -0.94
CKS1B-206ENST00000474215 APH1BQ8WW43 257 aa9.16□□□□□ -0.94
CKS1B-206ENST00000474215 TAF15Q92804 592 aaKnown RBP eCLIP9.16□□□□□ -0.94
CKS1B-206ENST00000474215 SLAMF9Q96A28 289 aa9.16□□□□□ -0.94
CKS1B-206ENST00000474215 ZNF649Q9BS31 505 aa9.16□□□□□ -0.94
CKS1B-206ENST00000474215 FAM234AQ9H0X4 552 aa9.16□□□□□ -0.94
CKS1B-206ENST00000474215 DPAGT1Q9H3H5 408 aa9.16□□□□□ -0.94
CKS1B-206ENST00000474215 BOLA1Q9Y3E2 137 aa9.16□□□□□ -0.94
CKS1B-206ENST00000474215 ANK2Q01484 3957 aa9.16□□□□□ -0.94
CKS1B-206ENST00000474215 hCG_1809904A0A1W2PP81 198 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 A0A1W2PPE2 198 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 A0A1W2PR64 198 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 A0A1W2PRV1 198 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 E9PI62 339 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 K7N7A8 449 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 WBP4O75554 376 aaKnown RBP9.15□□□□□ -0.94
CKS1B-206ENST00000474215 ZFPL1O95159 310 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 CYB5AP00167 134 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 MT-ND2P03891 347 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 FBP1P09467 338 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 OCM2P0CE71 109 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 OCMP0CE72 109 aaPredicted RBP9.15□□□□□ -0.94
CKS1B-206ENST00000474215 OMGP23515 440 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 AZGP1P25311 298 aaKnown RBP9.15□□□□□ -0.94
CKS1B-206ENST00000474215 GBX2P52951 348 aaPredicted RBP9.15□□□□□ -0.94
CKS1B-206ENST00000474215 COL10A1Q03692 680 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 ACSM1Q08AH1 577 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 SMN1Q16637 294 aaKnown RBP9.15□□□□□ -0.94
CKS1B-206ENST00000474215 LRRC36Q1X8D7 754 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 SHISA2Q6UWI4 295 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 LHFPL2Q6ZUX7 228 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 LDLRAD3Q86YD5 345 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 Q8IYB0 196 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 PNKDQ8N490 385 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 PACRGLQ8N7B6 248 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 ASCC1Q8N9N2 400 aaKnown RBP9.15□□□□□ -0.94
CKS1B-206ENST00000474215 OR4M1Q8NGD0 313 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 OR51A4Q8NGJ6 313 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 HAVCR2Q8TDQ0 301 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 DYRK2Q92630 601 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 SPSB1Q96BD6 273 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 SEBOXQ9HB31 216 aaPredicted RBP9.15□□□□□ -0.94
CKS1B-206ENST00000474215 FGF20Q9NP95 211 aaPredicted RBP9.15□□□□□ -0.94
CKS1B-206ENST00000474215 C8orf4Q9NR00 106 aa9.15□□□□□ -0.94
CKS1B-206ENST00000474215 SF3B6Q9Y3B4 125 aaKnown RBP9.15□□□□□ -0.94
CKS1B-206ENST00000474215 NBEAL1Q6ZS30 2694 aa9.15□□□□□ -0.95
CKS1B-206ENST00000474215 MEIOCA2RUB1 952 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 TMEM212A6NML5 194 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 ZNF737O75373 536 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 PAHP00439 452 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 CCDC159P0C7I6 412 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 LIMS3P0CW19 117 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 LIMS4P0CW20 117 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 MDKP21741 143 aaPredicted RBP9.14□□□□□ -0.95
CKS1B-206ENST00000474215 SAA4P35542 130 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 NPBWR2P48146 333 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 RPL15P61313 204 aaKnown RBP9.14□□□□□ -0.95
CKS1B-206ENST00000474215 PDZK1IP1Q13113 114 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 MIDNQ504T8 468 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 ZNF691Q5VV52 312 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 TTC23Q5W5X9 447 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 HCP5Q6MZN7 132 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 GDPD3Q7L5L3 318 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 SERPINA12Q8IW75 414 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 FAM58AQ8N1B3 248 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 C11orf42Q8N5U0 333 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 OR5D14Q8NGL3 314 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 OR13C9Q8NGT0 318 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 OR5AK2Q8NH90 309 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 SGMS2Q8NHU3 365 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 CYGBQ8WWM9 190 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 EMG1Q92979 244 aaKnown RBP9.14□□□□□ -0.95
CKS1B-206ENST00000474215 OPALINQ96PE5 141 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 JAM3Q9BX67 310 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 HEXA-AS1Q9H8Q6 139 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 RBFOX1Q9NWB1 397 aaKnown RBP9.14□□□□□ -0.95
CKS1B-206ENST00000474215 C1RLQ9NZP8 487 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 MMP24Q9Y5R2 645 aa9.14□□□□□ -0.95
CKS1B-206ENST00000474215 TRBV2A0A0J9YWF9 115 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 A0A1B0GUS0 222 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 SPRY1O43609 319 aaPredicted RBP9.13□□□□□ -0.95
CKS1B-206ENST00000474215 ANGPTL7O43827 346 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 GPR137BO60478 399 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 ALX3O95076 343 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 NDUFA7O95182 113 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 CLIC3O95833 236 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 HAND1O96004 215 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 CCL3L1P16619 93 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 BCL3P20749 454 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 DCKP27707 260 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 POU3F4P49335 361 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 ETV1P50549 477 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 RAG2P55895 527 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 RELBQ01201 579 aa9.13□□□□□ -0.95
CKS1B-206ENST00000474215 RCN1Q15293 331 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms