RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 COL10A1Q03692 680 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 BLMHQ13867 455 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 LRRC36Q1X8D7 754 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 LPCAT4Q643R3 524 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 HCP5Q6MZN7 132 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 ASCC1Q8N9N2 400 aaKnown RBP14.67□□□□□ -0.06
UPF3A-203ENST00000474056 OR13C3Q8NGS6 347 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 OPALINQ96PE5 141 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 ZNF747Q9BV97 191 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 INPP5EQ9NRR6 644 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 ZNRD1Q9P1U0 126 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 IL36RNQ9UBH0 155 aa14.67□□□□□ -0.06
UPF3A-203ENST00000474056 SPRY1O43609 319 aaPredicted RBP14.66□□□□□ -0.06
UPF3A-203ENST00000474056 CCL3L1P16619 93 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 NPBWR2P48146 333 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 UBE2E1P51965 193 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 RELBQ01201 579 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 ZNF273Q14593 569 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 NCR3LG1Q68D85 454 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 TMEM200BQ69YZ2 307 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 LHFPL2Q6ZUX7 228 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 RNF144BQ7Z419 303 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 MKXQ8IYA7 352 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 OR13C9Q8NGT0 318 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 CNIH3Q8TBE1 160 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 TBC1D15Q8TC07 691 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 EMG1Q92979 244 aaKnown RBP14.66□□□□□ -0.06
UPF3A-203ENST00000474056 RFT1Q96AA3 541 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 SPACA5Q96QH8 159 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 MYCBPQ99417 103 aaPredicted RBP14.66□□□□□ -0.06
UPF3A-203ENST00000474056 FAM234AQ9H0X4 552 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 RBFOX1Q9NWB1 397 aaKnown RBP14.66□□□□□ -0.06
UPF3A-203ENST00000474056 CAB39Q9Y376 341 aaPredicted RBP14.66□□□□□ -0.06
UPF3A-203ENST00000474056 FAM96BQ9Y3D0 163 aa14.66□□□□□ -0.06
UPF3A-203ENST00000474056 MEIOCA2RUB1 952 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 K7N7A8 449 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 ZNF737O75373 536 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 FBP1P09467 338 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 LIMS3P0CW19 117 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 LIMS4P0CW20 117 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 PIPP12273 146 aaPredicted RBP14.65□□□□□ -0.06
UPF3A-203ENST00000474056 BCL3P20749 454 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 PRKACBP22694 351 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 PEX2P28328 305 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 SAA4P35542 130 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 MTCP1P56278 107 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 ERVFRD-1P60508 538 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 ZNF691Q5VV52 312 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 EGFL6Q8IUX8 553 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 C11orf42Q8N5U0 333 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 OR5D13Q8NGL4 314 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 PDCD1LG2Q9BQ51 273 aa14.65□□□□□ -0.06
UPF3A-203ENST00000474056 TRBV2A0A0J9YWF9 115 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 ANGPTL7O43827 346 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 ZFPL1O95159 310 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 CRYBA1P05813 215 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 CHRM2P08172 466 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 CALCBP10092 127 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 GTF2A1P52655 376 aaPredicted RBP14.64□□□□□ -0.07
UPF3A-203ENST00000474056 RCN1Q15293 331 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 TAF9Q16594 264 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 KLHL22Q53GT1 634 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 CRIP3Q6Q6R5 217 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 Q8IYB0 196 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 C17orf50Q8WW18 174 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 CYGBQ8WWM9 190 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 DYRK2Q92630 601 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 SPSB1Q96BD6 273 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 JAM3Q9BX67 310 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 FGF20Q9NP95 211 aaPredicted RBP14.64□□□□□ -0.07
UPF3A-203ENST00000474056 C1RLQ9NZP8 487 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 TRRAPQ9Y4A5 3859 aa14.64□□□□□ -0.07
UPF3A-203ENST00000474056 IGKV1-12A0A0C4DH73 117 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 TMEM82A0PJX8 343 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 MEX3AA1L020 520 aaKnown RBP14.63□□□□□ -0.07
UPF3A-203ENST00000474056 TMEM212A6NML5 194 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 GPR137BO60478 399 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 HAND1O96004 215 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 IGKV1D-12P01611 117 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 OCM2P0CE71 109 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 OCMP0CE72 109 aaPredicted RBP14.63□□□□□ -0.07
UPF3A-203ENST00000474056 PRKACAP17612 351 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 GBX2P52951 348 aaPredicted RBP14.63□□□□□ -0.07
UPF3A-203ENST00000474056 SNU13P55769 128 aaKnown RBP14.63□□□□□ -0.07
UPF3A-203ENST00000474056 RAG2P55895 527 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 ACSM1Q08AH1 577 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 MRPL28Q13084 256 aaKnown RBP14.63□□□□□ -0.07
UPF3A-203ENST00000474056 PDZK1IP1Q13113 114 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 XAF1Q6GPH4 301 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 C17orf107Q6ZR85 190 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 FAM58AQ8N1B3 248 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 OR5D18Q8NGL1 313 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 OR5AK2Q8NH90 309 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 SNX22Q96L94 193 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 COMMD4Q9H0A8 199 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 DPAGT1Q9H3H5 408 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 ZCCHC4Q9H5U6 513 aa14.63□□□□□ -0.07
UPF3A-203ENST00000474056 SF3B6Q9Y3B4 125 aaKnown RBP14.63□□□□□ -0.07
UPF3A-203ENST00000474056 A0A1W2PPH5 198 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 ANKRD65E5RJM6 399 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms