RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 UFD1Q92890 307 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 SDSLQ96GA7 329 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 PGLYRP3Q96LB9 341 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 OCEL1Q9H607 264 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 CNTD2Q9H8S5 307 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 ELL3Q9HB65 397 aaPredicted RBP11.41□□□□□ -0.58
USF1-205ENST00000473969 RHOFQ9HBH0 211 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 HES4Q9HCC6 221 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 TMEM138Q9NPI0 162 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 DNHD1Q96M86 4753 aa11.41□□□□□ -0.58
USF1-205ENST00000473969 ABCA2Q9BZC7 2435 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 A0A1B0GW55 424 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 A0A1W2PQ09 198 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 ZNF879B4DU55 563 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 C22orf46C9J442 243 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 ANGPTL7O43827 346 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 AVPP01185 164 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 ALDOBP05062 364 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 DUX4L2P0CJ85 424 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 DUX4L3P0CJ86 424 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 DUX4L4P0CJ87 422 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 DUX4L5P0CJ88 424 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 DUX4L6P0CJ89 424 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 DUX4L7P0CJ90 424 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 PPIAL4GP0DN37 164 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 PRKACAP17612 351 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 AMY2BP19961 511 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 BCL3P20749 454 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 TGFBR2P37173 567 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 CAV3P56539 151 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 FGF12P61328 243 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 ERVK11-1P61568 191 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 PAX2Q02962 417 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 GPR50Q13585 617 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 IRF3Q14653 427 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 DGUOKQ16854 277 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 DDI2Q5TDH0 399 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 DUX4L9Q6RFH8 374 aaPredicted RBP11.4□□□□□ -0.58
USF1-205ENST00000473969 ZSCAN4Q8NAM6 433 aaPredicted RBP11.4□□□□□ -0.58
USF1-205ENST00000473969 ZNRF1Q8ND25 227 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 SGCDQ92629 289 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 OR14A2Q96R54 314 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 OR5M11Q96RB7 305 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 YTHDF1Q9BYJ9 559 aaKnown RBP11.4□□□□□ -0.58
USF1-205ENST00000473969 FAM192AQ9GZU8 254 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 DUX4Q9UBX2 424 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 OPN4Q9UHM6 478 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 RPUSD1Q9UJJ7 312 aaKnown RBP11.4□□□□□ -0.58
USF1-205ENST00000473969 ZNF222Q9UK12 451 aa11.4□□□□□ -0.58
USF1-205ENST00000473969 NIPBLQ6KC79 2804 aaeCLIP11.4□□□□□ -0.59
USF1-205ENST00000473969 NAV3Q8IVL0 2385 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 A0A1W2PPH5 198 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 SH2D1BO14796 132 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 MRPS14O60783 128 aaKnown RBP11.39□□□□□ -0.59
USF1-205ENST00000473969 TOX4O94842 621 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 TFF1P04155 84 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 SELLP14151 372 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 EPHA1P21709 976 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 ZNF93P35789 620 aaPredicted RBP11.39□□□□□ -0.59
USF1-205ENST00000473969 CEBPDP49716 269 aaPredicted RBP11.39□□□□□ -0.59
USF1-205ENST00000473969 BMXP51813 675 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 GABARAPL2P60520 117 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 BLMHQ13867 455 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 C1orf229Q6ZS94 237 aaPredicted RBP11.39□□□□□ -0.59
USF1-205ENST00000473969 BPIFB2Q8N4F0 458 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 SVOPQ8N4V2 548 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 CD177Q8N6Q3 437 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 ASCC1Q8N9N2 400 aaKnown RBP11.39□□□□□ -0.59
USF1-205ENST00000473969 OR51A2Q8NGJ7 313 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 OR5D13Q8NGL4 314 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 PPP1R35Q8TAP8 253 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 TBC1D15Q8TC07 691 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 TNFAIP8L1Q8WVP5 186 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 DMRTB1Q96MA1 342 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 PCGF1Q9BSM1 259 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 DCTN5Q9BTE1 182 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 TMED9Q9BVK6 235 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 FAM234AQ9H0X4 552 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 ISYNA1Q9NPH2 558 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 PCDHB16Q9NRJ7 776 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 RBFOX1Q9NWB1 397 aaKnown RBP11.39□□□□□ -0.59
USF1-205ENST00000473969 ONECUT1Q9UBC0 465 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 NUP50Q9UKX7 468 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 GSTK1Q9Y2Q3 226 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 LSM2Q9Y333 95 aaKnown RBP11.39□□□□□ -0.59
USF1-205ENST00000473969 MAB21L2Q9Y586 359 aa11.39□□□□□ -0.59
USF1-205ENST00000473969 A0A1W2PPK0 400 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 KDM4BO94953 1096 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 HAND1O96004 215 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 NPBWR2P48146 333 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 SNU13P55769 128 aaKnown RBP11.38□□□□□ -0.59
USF1-205ENST00000473969 RPS11P62280 158 aaKnown RBP eCLIP11.38□□□□□ -0.59
USF1-205ENST00000473969 ARF6P62330 175 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 COL10A1Q03692 680 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 RSU1Q15404 277 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 TRAM1Q15629 374 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 ACSM3Q53FZ2 586 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 SPIN3Q5JUX0 258 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 GPR157Q5UAW9 335 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 LIPKQ5VXJ0 399 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms