RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 BORCS8Q96FH0 119 aa18.28■□□□□ 0.52
C9orf3-213ENST00000471978 OSBPL10Q9BXB5 764 aa18.28■□□□□ 0.52
C9orf3-213ENST00000471978 GNG8Q9UK08 70 aa18.28■□□□□ 0.52
C9orf3-213ENST00000471978 PRKDCP78527 4128 aaKnown RBP18.28■□□□□ 0.52
C9orf3-213ENST00000471978 LOC107986453A0A1B0GWG9 222 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 MEX3AA1L020 520 aaKnown RBP18.27■□□□□ 0.52
C9orf3-213ENST00000471978 SAC3D1A6NKF1 404 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 EFNB2P52799 333 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 CDC42P60953 191 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 HERPUD1Q15011 391 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 TP53I3Q53FA7 332 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 C11orf88Q6PI97 169 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 LIAT1Q6ZQX7 453 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 Q6ZTK2 550 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 SLC25A26Q70HW3 274 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 GDPD3Q7L5L3 318 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 FAM220AQ7Z4H9 259 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 LHFPL4Q7Z7J7 247 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 EGFL6Q8IUX8 553 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 OR2T6Q8NHC8 308 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 PIFOQ8TCI5 191 aa18.27■□□□□ 0.52
C9orf3-213ENST00000471978 RANBP3Q9H6Z4 567 aaPredicted RBP18.27■□□□□ 0.52
C9orf3-213ENST00000471978 FAM90A8PA6NJQ4 464 aa18.26■□□□□ 0.51
C9orf3-213ENST00000471978 ARG1P05089 322 aa18.26■□□□□ 0.51
C9orf3-213ENST00000471978 CSF1P09603 554 aa18.26■□□□□ 0.51
C9orf3-213ENST00000471978 UBCP0CG48 685 aaKnown RBP18.26■□□□□ 0.51
C9orf3-213ENST00000471978 ZNF728P0DKX0 622 aa18.26■□□□□ 0.51
C9orf3-213ENST00000471978 KIR3DL2P43630 455 aa18.26■□□□□ 0.51
C9orf3-213ENST00000471978 ZNF85Q03923 595 aa18.26■□□□□ 0.51
C9orf3-213ENST00000471978 CNN3Q15417 329 aaKnown RBP18.26■□□□□ 0.51
C9orf3-213ENST00000471978 PLA1AQ53H76 456 aa18.26■□□□□ 0.51
C9orf3-213ENST00000471978 RDH10Q8IZV5 341 aa18.26■□□□□ 0.51
C9orf3-213ENST00000471978 OR13D1Q8NGV5 346 aa18.26■□□□□ 0.51
C9orf3-213ENST00000471978 C10orf35Q96D05 121 aa18.26■□□□□ 0.51
C9orf3-213ENST00000471978 NPFFR1Q9GZQ6 430 aa18.26■□□□□ 0.51
C9orf3-213ENST00000471978 CHST1O43916 411 aa18.25■□□□□ 0.51
C9orf3-213ENST00000471978 CIB2O75838 187 aa18.25■□□□□ 0.51
C9orf3-213ENST00000471978 RBP4P02753 201 aa18.25■□□□□ 0.51
C9orf3-213ENST00000471978 ISL1P61371 349 aa18.25■□□□□ 0.51
C9orf3-213ENST00000471978 OR8H2Q8N162 312 aa18.25■□□□□ 0.51
C9orf3-213ENST00000471978 DYNAPQ8N1N2 210 aa18.25■□□□□ 0.51
C9orf3-213ENST00000471978 PP6455Q8WZ26 134 aa18.25■□□□□ 0.51
C9orf3-213ENST00000471978 EMG1Q92979 244 aaKnown RBP18.25■□□□□ 0.51
C9orf3-213ENST00000471978 SNX22Q96L94 193 aa18.25■□□□□ 0.51
C9orf3-213ENST00000471978 FOXJ3Q9UPW0 622 aa18.25■□□□□ 0.51
C9orf3-213ENST00000471978 TBL2Q9Y4P3 447 aaKnown RBP18.25■□□□□ 0.51
C9orf3-213ENST00000471978 TET2Q6N021 2002 aaPredicted RBP18.24■□□□□ 0.51
C9orf3-213ENST00000471978 TMEM82A0PJX8 343 aa18.24■□□□□ 0.51
C9orf3-213ENST00000471978 VGLL3A8MV65 326 aa18.24■□□□□ 0.51
C9orf3-213ENST00000471978 RBP2P50120 134 aa18.24■□□□□ 0.51
C9orf3-213ENST00000471978 ATP1B3P54709 279 aa18.24■□□□□ 0.51
C9orf3-213ENST00000471978 MEF2CQ06413 473 aaPredicted RBP18.24■□□□□ 0.51
C9orf3-213ENST00000471978 EDDM3AQ14507 147 aa18.24■□□□□ 0.51
C9orf3-213ENST00000471978 Q8IYB0 196 aa18.24■□□□□ 0.51
C9orf3-213ENST00000471978 TRUB1Q8WWH5 349 aaKnown RBP18.24■□□□□ 0.51
C9orf3-213ENST00000471978 RNF166Q96A37 237 aaPredicted RBP18.24■□□□□ 0.51
C9orf3-213ENST00000471978 NKX3-1Q99801 234 aaPredicted RBP18.24■□□□□ 0.51
C9orf3-213ENST00000471978 IMPAD1Q9NX62 359 aa18.24■□□□□ 0.51
C9orf3-213ENST00000471978 MEGF11A6BM72 1044 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 ODF3BA8MYP8 253 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 HAND1O96004 215 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 IGHV1-8P0DP01 117 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 RAB13P51153 203 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 FAM189A2Q15884 450 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 TMEM244Q5VVB8 128 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 ENTHD1Q8IYW4 607 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 KLHDC1Q8N7A1 406 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 C11orf44Q8N8P7 122 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 DTX3Q8N9I9 347 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 DNAAF1Q8NEP3 725 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 OR11H6Q8NGC7 330 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 OR2G2Q8NGZ5 317 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 FOXRED1Q96CU9 486 aaPredicted RBP18.23■□□□□ 0.51
C9orf3-213ENST00000471978 MALSU1Q96EH3 234 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 ADAT3Q96EY9 351 aaPredicted RBP18.23■□□□□ 0.51
C9orf3-213ENST00000471978 ZNF714Q96N38 554 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 IL36RNQ9UBH0 155 aa18.23■□□□□ 0.51
C9orf3-213ENST00000471978 hADV38S2A0JD32 116 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 ENTPD6O75354 484 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 CYB5AP00167 134 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 IGHA1P01876 353 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 GABRR1P24046 479 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 NPBWR2P48146 333 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 POU3F4P49335 361 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 MTCP1P56278 107 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 ACTC1P68032 377 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 ACTA1P68133 377 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 DYNC1I2Q13409 638 aaKnown RBP18.22■□□□□ 0.51
C9orf3-213ENST00000471978 SSX2Q16385 188 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 ZNF626Q68DY1 528 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 HIST2H2BDQ6DRA6 164 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 TCF23Q7RTU1 214 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 KCTD20Q7Z5Y7 419 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 C1QL4Q86Z23 238 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 PYDC1Q8WXC3 89 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 RNFT2Q96EX2 444 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 CHST6Q9GZX3 395 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 SEBOXQ9HB31 216 aaPredicted RBP18.22■□□□□ 0.51
C9orf3-213ENST00000471978 ABCB10Q9NRK6 738 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 RBFOX1Q9NWB1 397 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms