RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 OR13C6PQ8NH95 151 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 PELI1Q96FA3 418 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 RSG1Q9BU20 258 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 NKX6-2Q9C056 277 aaPredicted RBP11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 MED13Q9UHV7 2174 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 E5RGE8 158 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 CSN3P07498 182 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 PSMB6P28072 239 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 FCRL6Q6DN72 434 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 FAM122BQ7Z309 247 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TMEM38AQ9H6F2 299 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ANXA10Q9UJ72 324 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 NSG2Q9Y328 171 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 SOX21Q9Y651 276 aaPredicted RBP11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TMEM30CPA0ZSE6 113 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 M0R2Z0 102 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TO15178 435 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 OR4A8P0C604 315 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ACAA2P42765 397 aaKnown RBP11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 RPL24P83731 157 aaKnown RBP11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 DOLPP1Q86YN1 238 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 PTPMT1Q8WUK0 201 aaPredicted RBP11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 SNX22Q96L94 193 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 LAT2Q9GZY6 243 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 CA10Q9NS85 328 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 A0A0A6YYJ9 748 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 KLF7O75840 302 aaPredicted RBP11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 C3AR1Q16581 482 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 FAM71E1Q6IPT2 247 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 NGFP01138 241 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 OR5AC1P0C628 307 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 FZD2Q14332 565 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ETFDHQ16134 617 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 C1orf210Q8IVY1 113 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 MEGF10Q96KG7 1140 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TRDV1A0A1B0GX56 115 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 LMX1BO60663 402 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 BSGP35613 385 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 PPICP45877 212 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TNXAQ16473 311 aa11.87□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 SEMA7AO75326 666 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 CD3DP04234 171 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 SOX8P57073 446 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TCTAP57738 103 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 THSD4Q6ZMP0 1018 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 SLC38A6Q8IZM9 456 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 RTN4IP1Q8WWV3 396 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 PIGMQ9H3S5 423 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 HOXC11O43248 304 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TMIGD3P0DMS9 266 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ADAMTS5Q9UNA0 930 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 C19orf53Q9UNZ5 99 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 RCL1Q9Y2P8 373 aaKnown RBP11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 R4GMQ9 66 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TMEM238LA0A1B0GVL6 79 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 A6NJY4 79 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 BRS3P32247 399 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TFPI2P48307 235 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ZNF273Q14593 569 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 CA13Q8N1Q1 262 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ST8SIA1Q92185 356 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 MRGPRX4Q96LA9 322 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 PCGF1Q9BSM1 259 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 S1PR5Q9H228 398 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 A0A1B0GUH1 482 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 MASP2O00187 686 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 KLF3P57682 345 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TMEM183BQ1AE95 376 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 LHX8Q68G74 356 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 KLHDC8BQ8IXV7 354 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ALG1L2C9J202 215 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 TOX3O15405 576 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 AKR7A2O43488 359 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ACTL6AO96019 429 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 PATE4P0C8F1 98 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 FAM27D1Q5T7N8 215 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 SLC16A12Q6ZSM3 486 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 SPEM1Q8N4L4 309 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 FOXB1Q99853 325 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 MRPS16Q9Y3D3 137 aaKnown RBP11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 SHANK1Q9Y566 2161 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 CDS2O95674 445 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 HRASP01112 189 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 LIPAP38571 399 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 LIMK1P53667 647 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 EMC4Q5J8M3 183 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 RSPO2Q6UXX9 243 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 SIGLEC11Q96RL6 698 aa11.86□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 K7ESF4 209 aa11.85□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 EGR1P18146 543 aa11.85□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 HERPUD1Q15011 391 aa11.85□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 MMP25Q9NPA2 562 aa11.85□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 LIPGQ9Y5X9 500 aa11.85□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 ABLIM3O94929 683 aa11.85□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 MELTFP08582 738 aa11.85□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 GIPP09681 153 aaPredicted RBP11.85□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 FAHD2BQ6P2I3 314 aaPredicted RBP11.85□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 STAC2Q6ZMT1 411 aa11.85□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 APOBEC3DQ96AK3 386 aaPredicted RBP11.85□□□□□ -0.51
NPHP3-ACAD11-201ENST00000471702 LRRC61Q9BV99 259 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms