RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ACP7Q6ZNF0 438 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 OR2W3Q7Z3T1 314 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 DEFB108BQ8NET1 73 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 OR5T2Q8NGG2 359 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 NICN1Q9BSH3 213 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 LPAR5Q9H1C0 372 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 HES4Q9HCC6 221 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 ZNF701Q9NV72 531 aaPredicted RBP16.12■□□□□ 0.17
PSPC1-203ENST00000471658 PTTG2Q9NZH5 202 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 FBLN5Q9UBX5 448 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 A0A0A6YYD4 124 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 RGS5O15539 181 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 ZNF780AO75290 641 aaPredicted RBP16.12■□□□□ 0.17
PSPC1-203ENST00000471658 EIF4EP06730 217 aaKnown RBP16.12■□□□□ 0.17
PSPC1-203ENST00000471658 GTF2F2P13984 249 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 FGF12P61328 243 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 GPR176Q14439 515 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 ZNF181Q2M3W8 571 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 LAX1Q8IWV1 398 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 CMTM4Q8IZR5 234 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 TMEM59Q9BXS4 323 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 CST11Q9H112 138 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 MMP27Q9H306 513 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 RAB22AQ9UL26 194 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 ETV7Q9Y603 341 aa16.12■□□□□ 0.17
PSPC1-203ENST00000471658 ABCA12Q86UK0 2595 aa16.11■□□□□ 0.17
PSPC1-203ENST00000471658 LRRC30A6NM36 301 aa16.11■□□□□ 0.17
PSPC1-203ENST00000471658 SSX4O60224 188 aa16.11■□□□□ 0.17
PSPC1-203ENST00000471658 ELK1P19419 428 aa16.11■□□□□ 0.17
PSPC1-203ENST00000471658 RPS27AP62979 156 aaKnown RBP16.11■□□□□ 0.17
PSPC1-203ENST00000471658 MADCAM1Q13477 382 aa16.11■□□□□ 0.17
PSPC1-203ENST00000471658 CARTPTQ16568 116 aa16.11■□□□□ 0.17
PSPC1-203ENST00000471658 RTN4RL2Q86UN3 420 aa16.11■□□□□ 0.17
PSPC1-203ENST00000471658 HPS1Q92902 700 aa16.11■□□□□ 0.17
PSPC1-203ENST00000471658 PERPQ96FX8 193 aa16.11■□□□□ 0.17
PSPC1-203ENST00000471658 MRI1Q9BV20 369 aa16.11■□□□□ 0.17
PSPC1-203ENST00000471658 RHBDL2Q9NX52 303 aa16.11■□□□□ 0.17
PSPC1-203ENST00000471658 ST3GAL6Q9Y274 331 aa16.11■□□□□ 0.17
PSPC1-203ENST00000471658 GEMIN2O14893 280 aaKnown RBP16.1■□□□□ 0.17
PSPC1-203ENST00000471658 CLPXO76031 633 aa16.1■□□□□ 0.17
PSPC1-203ENST00000471658 PTH2RP49190 550 aa16.1■□□□□ 0.17
PSPC1-203ENST00000471658 CEBPDP49716 269 aaPredicted RBP16.1■□□□□ 0.17
PSPC1-203ENST00000471658 ART1P52961 327 aa16.1■□□□□ 0.17
PSPC1-203ENST00000471658 ATP5J2P56134 94 aa16.1■□□□□ 0.17
PSPC1-203ENST00000471658 DYNC1I2Q13409 638 aaKnown RBP16.1■□□□□ 0.17
PSPC1-203ENST00000471658 TAF9Q16594 264 aa16.1■□□□□ 0.17
PSPC1-203ENST00000471658 MOGAT2Q3SYC2 334 aa16.1■□□□□ 0.17
PSPC1-203ENST00000471658 Q8IYB0 196 aa16.1■□□□□ 0.17
PSPC1-203ENST00000471658 OR51T1Q8NGJ9 327 aa16.1■□□□□ 0.17
PSPC1-203ENST00000471658 Q96M66 194 aa16.1■□□□□ 0.17
PSPC1-203ENST00000471658 ATG5Q9H1Y0 275 aa16.1■□□□□ 0.17
PSPC1-203ENST00000471658 DLL4Q9NR61 685 aa16.1■□□□□ 0.17
PSPC1-203ENST00000471658 A3GALT2U3KPV4 340 aa16.1■□□□□ 0.17
PSPC1-203ENST00000471658 APCP25054 2843 aa16.1■□□□□ 0.17
PSPC1-203ENST00000471658 RAB6AP20340 208 aa16.09■□□□□ 0.17
PSPC1-203ENST00000471658 RBM11P57052 281 aaKnown RBP16.09■□□□□ 0.17
PSPC1-203ENST00000471658 SCAND1P57086 179 aa16.09■□□□□ 0.17
PSPC1-203ENST00000471658 MRPS11P82912 194 aaKnown RBP16.09■□□□□ 0.17
PSPC1-203ENST00000471658 CDH24Q86UP0 819 aa16.09■□□□□ 0.17
PSPC1-203ENST00000471658 ZNF525Q8N782 197 aa16.09■□□□□ 0.17
PSPC1-203ENST00000471658 PCDHB16Q9NRJ7 776 aa16.09■□□□□ 0.17
PSPC1-203ENST00000471658 RASL12Q9NYN1 266 aa16.09■□□□□ 0.17
PSPC1-203ENST00000471658 DNAJB11Q9UBS4 358 aa16.09■□□□□ 0.17
PSPC1-203ENST00000471658 OR14J1Q9UGF5 321 aa16.09■□□□□ 0.17
PSPC1-203ENST00000471658 NPTNQ9Y639 398 aa16.09■□□□□ 0.17
PSPC1-203ENST00000471658 TANC2Q9HCD6 1990 aa16.09■□□□□ 0.17
PSPC1-203ENST00000471658 POLQO75417 2590 aa16.09■□□□□ 0.17
PSPC1-203ENST00000471658 CSMD2Q7Z408 3487 aa16.09■□□□□ 0.17
PSPC1-203ENST00000471658 PPIAL4EA0A075B759 164 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 PPIAL4DF5H284 164 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 IFNL4K9M1U5 179 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 SOCS1O15524 211 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 PPIAL4FP0DN26 164 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 GABRR1P24046 479 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 VEGFCP49767 419 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 CAPZA1P52907 286 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 SCN1BQ07699 218 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 UBE2NLQ5JXB2 153 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 AVPI1Q5T686 147 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 FAM90A1Q86YD7 464 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 C1orf87Q8N0U7 546 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 OR6Q1Q8NGQ2 317 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 PTX4Q96A99 478 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 TM2D1Q9BX74 207 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 RHOFQ9HBH0 211 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 NLKQ9UBE8 527 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 WIPI2Q9Y4P8 454 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 PPIAL4AQ9Y536 164 aa16.08■□□□□ 0.17
PSPC1-203ENST00000471658 RFPL4AA6NLU0 287 aa16.08■□□□□ 0.16
PSPC1-203ENST00000471658 FAM25AB3EWG3 89 aa16.08■□□□□ 0.16
PSPC1-203ENST00000471658 FAM25CB3EWG5 89 aa16.08■□□□□ 0.16
PSPC1-203ENST00000471658 FAM25GB3EWG6 89 aa16.08■□□□□ 0.16
PSPC1-203ENST00000471658 RFPL4AL1F8VTS6 287 aa16.08■□□□□ 0.16
PSPC1-203ENST00000471658 PSG2P11465 335 aa16.08■□□□□ 0.16
PSPC1-203ENST00000471658 TNFSF8P32971 234 aa16.08■□□□□ 0.16
PSPC1-203ENST00000471658 RANBP1P43487 201 aa16.08■□□□□ 0.16
PSPC1-203ENST00000471658 SIGIRRQ6IA17 410 aa16.08■□□□□ 0.16
PSPC1-203ENST00000471658 IZUMO1Q8IYV9 350 aa16.08■□□□□ 0.16
PSPC1-203ENST00000471658 CD177Q8N6Q3 437 aa16.08■□□□□ 0.16
PSPC1-203ENST00000471658 MRPS24Q96EL2 167 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms