RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 GNPDA2Q8TDQ7 276 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 TMEM239Q8WW34 195 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 RASD2Q96D21 266 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 C4orf36Q96KX1 117 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 RAB40CQ96S21 281 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 SLC29A1Q99808 456 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 PRSS27Q9BQR3 290 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 ZNF426Q9BUY5 554 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 POTEKPQ9BYX7 375 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 LPAR2Q9HBW0 351 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 CTPS2Q9NRF8 586 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 QPCTLQ9NXS2 382 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 RNF24Q9Y225 148 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 POFUT2Q9Y2G5 429 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 NTNG1Q9Y2I2 539 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 MED31Q9Y3C7 131 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 LRRC42Q9Y546 428 aa3.83□□□□□ -1.8
CCDC39-202ENST00000471307 CFAP47Q6ZTR5 3102 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 CACNA1GO43497 2377 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 TPRP12270 2363 aaKnown RBP3.82□□□□□ -1.8
CCDC39-202ENST00000471307 DNAJC13O75165 2243 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 TRAV36DV7A0A075B6V5 113 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 TMED7-TICAM2A0A0A6YYA0 188 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 ZSCAN5BA6NJL1 495 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 GJE1A6NN92 205 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 B4DXG7 233 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 L7N2F9 121 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 EI24O14681 340 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 TNFSF11O14788 317 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 OR2T1O43869 369 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 NPIPB7O75200 414 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 GLSO94925 669 aaPredicted RBP3.82□□□□□ -1.8
CCDC39-202ENST00000471307 F10P00742 488 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 HPNP05981 417 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 ZNF17P17021 662 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 GLRA1P23415 457 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 IGFBP5P24593 272 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 ELK4P28324 431 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 MDH2P40926 338 aaKnown RBP3.82□□□□□ -1.8
CCDC39-202ENST00000471307 ID1P41134 155 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 OMPP47874 163 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 GSSP48637 474 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 DNASE1L1P49184 302 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 SLC25A1P53007 311 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 PRRX1P54821 245 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 UGT2B15P54855 530 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 ESRRGP62508 458 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 SRYQ05066 204 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 FGL1Q08830 312 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 MERTKQ12866 999 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 TSPAN31Q12999 210 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 SLC10A1Q14973 349 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 PLPPR5Q32ZL2 321 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 TTC23Q5W5X9 447 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 ASPHD2Q6ICH7 369 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 IZUMO2Q6UXV1 221 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 Q6ZPB1 254 aaPredicted RBP3.82□□□□□ -1.8
CCDC39-202ENST00000471307 RASSF6Q6ZTQ3 369 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 SLC22A16Q86VW1 577 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 NRMQ8IXM6 262 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 HS3ST5Q8IZT8 346 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 GTPBP8Q8N3Z3 284 aaPredicted RBP3.82□□□□□ -1.8
CCDC39-202ENST00000471307 DHRSXQ8N5I4 330 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 OR1K1Q8NGR3 316 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 MCHR2Q969V1 340 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 DDIT4LQ96D03 193 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 MRPL53Q96EL3 112 aaKnown RBP3.82□□□□□ -1.8
CCDC39-202ENST00000471307 AKR1E2Q96JD6 320 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 JSRP1Q96MG2 331 aaPredicted RBP3.82□□□□□ -1.8
CCDC39-202ENST00000471307 ZNF184Q99676 751 aaPredicted RBP3.82□□□□□ -1.8
CCDC39-202ENST00000471307 UCK2Q9BZX2 261 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 Q9H521 79 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 FN3KRPQ9HA64 309 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 ELL3Q9HB65 397 aaPredicted RBP3.82□□□□□ -1.8
CCDC39-202ENST00000471307 MEPEQ9NQ76 525 aaPredicted RBP3.82□□□□□ -1.8
CCDC39-202ENST00000471307 CHRNA9Q9UGM1 479 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 DKKL1Q9UK85 242 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 RAB26Q9ULW5 256 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 DIMT1Q9UNQ2 313 aaKnown RBP3.82□□□□□ -1.8
CCDC39-202ENST00000471307 TRAPPC4Q9Y296 219 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 C15orf41Q9Y2V0 281 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 FKBP7Q9Y680 259 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 DSPP15924 2871 aaKnown RBP3.82□□□□□ -1.8
CCDC39-202ENST00000471307 TNRC6AQ8NDV7 1962 aaKnown RBP3.82□□□□□ -1.8
CCDC39-202ENST00000471307 LOC400499M0QZD8 3231 aa3.82□□□□□ -1.8
CCDC39-202ENST00000471307 PIEZO2Q9H5I5 2752 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 ZNF407Q9C0G0 2248 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 IGKV1D-42A0A075B6H8 117 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 A0A075B6Q4 140 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 A0A0G2JMM0 328 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 LOC100130705A0A1B0GUX0 176 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 A0A1W2PPB8 328 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 A0A1W2PRS3 328 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 TMEM72A0PK05 275 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 HELTA6NFD8 242 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 C17orf51A8MQB3 221 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 KIR3DP1A8MWS1 328 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 EFCAB9A8MZ26 197 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 G3V3Y1 287 aa3.81□□□□□ -1.8
CCDC39-202ENST00000471307 DLGAP1O14490 977 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms