RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 SNAPC3Q92966 411 aa9.41□□□□□ -0.9
SND1-208ENST00000470463 DMRTA2Q96SC8 542 aa9.41□□□□□ -0.9
SND1-208ENST00000470463 GINS4Q9BRT9 223 aa9.41□□□□□ -0.9
SND1-208ENST00000470463 TRAF4Q9BUZ4 470 aaPredicted RBP9.41□□□□□ -0.9
SND1-208ENST00000470463 MED28Q9H204 178 aa9.41□□□□□ -0.9
SND1-208ENST00000470463 RIMS4Q9H426 269 aaPredicted RBP9.41□□□□□ -0.9
SND1-208ENST00000470463 ZMAT3Q9HA38 289 aaKnown RBP9.41□□□□□ -0.9
SND1-208ENST00000470463 MYOZ1Q9NP98 299 aaPredicted RBP9.41□□□□□ -0.9
SND1-208ENST00000470463 Q9UFV3 132 aa9.41□□□□□ -0.9
SND1-208ENST00000470463 TINAGQ9UJW2 476 aa9.41□□□□□ -0.9
SND1-208ENST00000470463 ZNF221Q9UK13 617 aa9.41□□□□□ -0.9
SND1-208ENST00000470463 KCNK7Q9Y2U2 307 aa9.41□□□□□ -0.9
SND1-208ENST00000470463 ALG5Q9Y673 324 aa9.41□□□□□ -0.9
SND1-208ENST00000470463 TRAV6A0A075B6T7 132 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 A0A1W2PP11 408 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 VSTM5A8MXK1 200 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 M0R1B8 84 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 TIMM8AO60220 97 aaPredicted RBP9.4□□□□□ -0.9
SND1-208ENST00000470463 PLATP00750 562 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 AMY2AP04746 511 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 FCER2P06734 321 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 CA6P23280 308 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 PTAFRP25105 342 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 CHATP28329 748 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 GLRXP35754 106 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 CA7P43166 264 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 OR3A3P47888 321 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 SRSF1Q07955 248 aaKnown RBP eCLIP9.4□□□□□ -0.9
SND1-208ENST00000470463 PSG7Q13046 419 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 SRSF7Q16629 238 aaKnown RBP eCLIP9.4□□□□□ -0.9
SND1-208ENST00000470463 FAHD2BQ6P2I3 314 aaPredicted RBP9.4□□□□□ -0.9
SND1-208ENST00000470463 RNF144BQ7Z419 303 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 MYPOPQ86VE0 399 aaPredicted RBP9.4□□□□□ -0.9
SND1-208ENST00000470463 CALHM1Q8IU99 346 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 FBXL14Q8N1E6 418 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 ZDHHC22Q8N966 263 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 BHLHE23Q8NDY6 225 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 OR51S1Q8NGJ8 323 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 OR4K15Q8NH41 348 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 NUDCD2Q8WVJ2 157 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 FAHD2AQ96GK7 314 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 ADAT1Q9BUB4 502 aaKnown RBP9.4□□□□□ -0.9
SND1-208ENST00000470463 CXXC4Q9H2H0 198 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 OR51B6Q9H340 312 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 OR51J1Q9H342 316 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 OR51I2Q9H344 312 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 GHITMQ9H3K2 345 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 POFUT1Q9H488 388 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 IFT22Q9H7X7 185 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 GLS2Q9UI32 602 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 MEMO1Q9Y316 297 aa9.4□□□□□ -0.9
SND1-208ENST00000470463 INTS1Q8N201 2190 aaKnown RBP9.39□□□□□ -0.91
SND1-208ENST00000470463 A0A0A6YYJ9 748 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 IGKV1-12A0A0C4DH73 117 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 A0A1B0GWJ7 208 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 UBE2QL1A1L167 161 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 MEIS3P1A6NDR6 274 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 WIPF3A6NGB9 483 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 H7C1Q1 480 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 SSX5O60225 188 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 CREBL2O60519 120 aaPredicted RBP9.39□□□□□ -0.91
SND1-208ENST00000470463 SNAPC5O75971 98 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 IGKV1D-12P01611 117 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 SFTPBP07988 381 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 ZNF250P15622 560 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 AMY2BP19961 511 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 PRSS12P56730 875 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 RBM39Q14498 530 aaKnown RBP9.39□□□□□ -0.91
SND1-208ENST00000470463 GRK1Q15835 563 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 TAF9Q16594 264 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 DMRTC1Q5HYR2 192 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 SPATA46Q5T0L3 261 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 HAGHLQ6PII5 290 aaPredicted RBP9.39□□□□□ -0.91
SND1-208ENST00000470463 GLDNQ6ZMI3 551 aaPredicted RBP9.39□□□□□ -0.91
SND1-208ENST00000470463 IDO2Q6ZQW0 420 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 GLCCI1Q86VQ1 547 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 NUP37Q8NFH4 326 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 BEST4Q8NFU0 473 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 OR5H2Q8NGV7 314 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 OR6F1Q8NGZ6 308 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 GIMAP1Q8WWP7 306 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 ASB13Q8WXK3 278 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 EMG1Q92979 244 aaKnown RBP9.39□□□□□ -0.91
SND1-208ENST00000470463 DACT3Q96B18 629 aaPredicted RBP9.39□□□□□ -0.91
SND1-208ENST00000470463 CCDC120Q96HB5 630 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 CMSS1Q9BQ75 279 aaKnown RBP9.39□□□□□ -0.91
SND1-208ENST00000470463 C1QTNF6Q9BXI9 259 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 COQ3Q9NZJ6 369 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 MYO18BQ8IUG5 2567 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 RTTNQ86VV8 2226 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 CFAP46Q8IYW2 2715 aa9.39□□□□□ -0.91
SND1-208ENST00000470463 COL6A6A6NMZ7 2263 aa9.38□□□□□ -0.91
SND1-208ENST00000470463 A0A0B4J293 547 aa9.38□□□□□ -0.91
SND1-208ENST00000470463 TRGV8A0A0C4DH27 118 aa9.38□□□□□ -0.91
SND1-208ENST00000470463 MCRIP1C9JLW8 97 aa9.38□□□□□ -0.91
SND1-208ENST00000470463 PYCARD-AS1I3L0S3 204 aa9.38□□□□□ -0.91
SND1-208ENST00000470463 GEMIN2O14893 280 aaKnown RBP9.38□□□□□ -0.91
SND1-208ENST00000470463 ARPC1BO15143 372 aaKnown RBP9.38□□□□□ -0.91
SND1-208ENST00000470463 NOS1APO75052 506 aaPredicted RBP9.38□□□□□ -0.91
SND1-208ENST00000470463 IGHV3-13P01766 116 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms