RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 ZNF260Q3ZCT1 412 aa12.82□□□□□ -0.36
COL4A5-203ENST00000470339 CDNFQ49AH0 187 aa12.82□□□□□ -0.36
COL4A5-203ENST00000470339 FAM209AQ5JX71 171 aa12.82□□□□□ -0.36
COL4A5-203ENST00000470339 STEAP3Q658P3 488 aa12.82□□□□□ -0.36
COL4A5-203ENST00000470339 SNX29P2Q8IUI4 249 aa12.82□□□□□ -0.36
COL4A5-203ENST00000470339 POC1AQ8NBT0 407 aa12.82□□□□□ -0.36
COL4A5-203ENST00000470339 CHST4Q8NCG5 386 aa12.82□□□□□ -0.36
COL4A5-203ENST00000470339 OR10Z1Q8NGY1 313 aa12.82□□□□□ -0.36
COL4A5-203ENST00000470339 SETD6Q8TBK2 473 aa12.82□□□□□ -0.36
COL4A5-203ENST00000470339 RAB3CQ96E17 227 aa12.82□□□□□ -0.36
COL4A5-203ENST00000470339 NRIP2Q9BQI9 281 aa12.82□□□□□ -0.36
COL4A5-203ENST00000470339 NICN1Q9BSH3 213 aa12.82□□□□□ -0.36
COL4A5-203ENST00000470339 MS4A5Q9H3V2 200 aa12.82□□□□□ -0.36
COL4A5-203ENST00000470339 ST3GAL6Q9Y274 331 aa12.82□□□□□ -0.36
COL4A5-203ENST00000470339 ABCA4P78363 2273 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 SOCS1O15524 211 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 SPRY3O43610 288 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 RHBDL1O75783 438 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 HIST1H1DP16402 221 aaKnown RBP12.81□□□□□ -0.36
COL4A5-203ENST00000470339 BLVRBP30043 206 aaPredicted RBP12.81□□□□□ -0.36
COL4A5-203ENST00000470339 PMELP40967 661 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 DEFA1P59665 94 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 DEFA3P59666 94 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 TNFAIP6P98066 277 aaPredicted RBP12.81□□□□□ -0.36
COL4A5-203ENST00000470339 IL13RA2Q14627 380 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 SWI5Q1ZZU3 235 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 MST1LQ2TV78 715 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 PCGF3Q3KNV8 242 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 TRIQKQ629K1 86 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 Q6ZTK2 550 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 FAM58AQ8N1B3 248 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 C19orf18Q8NEA5 215 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 GTF3AQ92664 365 aaKnown RBP12.81□□□□□ -0.36
COL4A5-203ENST00000470339 NEUROG1Q92886 237 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 YIPF5Q969M3 257 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 TRIM63Q969Q1 353 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 OR2V2Q96R30 315 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 SPOCK3Q9BQ16 436 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 FN3KRPQ9HA64 309 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 HES4Q9HCC6 221 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 RBFOX1Q9NWB1 397 aaKnown RBP12.81□□□□□ -0.36
COL4A5-203ENST00000470339 RASL12Q9NYN1 266 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 PLEKHA6Q9Y2H5 1048 aa12.81□□□□□ -0.36
COL4A5-203ENST00000470339 RBMX2Q9Y388 322 aaKnown RBP12.81□□□□□ -0.36
COL4A5-203ENST00000470339 USP9XQ93008 2570 aaPredicted RBP12.81□□□□□ -0.36
COL4A5-203ENST00000470339 FASNP49327 2511 aaKnown RBP12.8□□□□□ -0.36
COL4A5-203ENST00000470339 A0A1W2PQ09 198 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 A6NLC8 198 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 SERPINE3A8MV23 424 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 F8VVB4 439 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 F8VWA3 439 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 MFNGO00587 321 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 LPLP06858 475 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 TNFRSF1AP19438 455 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 DGCR2P98153 550 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 TESK1Q15569 626 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 MPPED2Q15777 294 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 TAF9Q16594 264 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 PLAC9Q5JTB6 97 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 WDR82Q6UXN9 313 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 MEX3BQ6ZN04 569 aaKnown RBP12.8□□□□□ -0.36
COL4A5-203ENST00000470339 MUC15Q8N387 334 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 OR52I2Q8NH67 350 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 GPX8Q8TED1 209 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 EGLN1Q9GZT9 426 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 IFT22Q9H7X7 185 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 FAIMQ9NVQ4 179 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 DYSFO75923 2080 aa12.8□□□□□ -0.36
COL4A5-203ENST00000470339 H7C417 338 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 GEMIN2O14893 280 aaKnown RBP12.79□□□□□ -0.36
COL4A5-203ENST00000470339 RBBP9O75884 186 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 ECDO95905 644 aaPredicted RBP12.79□□□□□ -0.36
COL4A5-203ENST00000470339 GLAP06280 429 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 GSTT2BP0CG30 244 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 PRKACAP17612 351 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 FUT3P21217 361 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 GABRR1P24046 479 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 CHATP28329 748 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 INPP1P49441 399 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 ZNF146Q15072 292 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 PIGYQ3MUY2 71 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 SPIN3Q5JUX0 258 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 PRAMEF6Q5VXH4 476 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 SIGIRRQ6IA17 410 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 FIP1L1Q6UN15 594 aaKnown RBP12.79□□□□□ -0.36
COL4A5-203ENST00000470339 FAM90A1Q86YD7 464 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 Q8TCH9 128 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 ITLN1Q8WWA0 313 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 DEDD2Q8WXF8 326 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 ST8SIA4Q92187 359 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 EMG1Q92979 244 aaKnown RBP12.79□□□□□ -0.36
COL4A5-203ENST00000470339 FBXW5Q969U6 566 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 SEH1LQ96EE3 360 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 ARHGAP5-AS1Q96IT6 56 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 NEDD4LQ96PU5 975 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 PECRQ9BY49 303 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 SEBOXQ9HB31 216 aaPredicted RBP12.79□□□□□ -0.36
COL4A5-203ENST00000470339 SPACA1Q9HBV2 294 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 PLEKHJ1Q9NW61 149 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 C1orf123Q9NWV4 160 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms