RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 GTF2F2P13984 249 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 CFPP27918 469 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 PRDX2P32119 198 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 CD80P33681 288 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 PITPNBP48739 271 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 DVL1P1P54792 670 aaPredicted RBP10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 FGF12P61328 243 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 IL13RA1P78552 427 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 INSL4Q14641 139 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 FAM189A2Q15884 450 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 LRRC10Q5BKY1 277 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 NHLRC3Q5JS37 347 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 FAM201AQ5SY85 155 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 FAM27D1Q5T7N8 215 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 CRIP3Q6Q6R5 217 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 LINC00596Q86U02 117 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 CIARTQ8N365 385 aaPredicted RBP10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 TEX29Q8N6K0 151 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 CHST4Q8NCG5 386 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 OR51T1Q8NGJ9 327 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 OR5D13Q8NGL4 314 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 OR6M1Q8NGM8 313 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 PPP1R35Q8TAP8 253 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 SLAMF9Q96A28 289 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 YIPF6Q96EC8 236 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 SPACA5Q96QH8 159 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 SSBP3Q9BWW4 388 aaPredicted RBP10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 CST11Q9H112 138 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 PPIL3Q9H2H8 161 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 CNTD2Q9H8S5 307 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 TXNL4BQ9NX01 149 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 CLN8Q9UBY8 286 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 ING4Q9UNL4 249 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 V9GY05 133 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 RFPL4AA6NLU0 287 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 RFPL4AL1F8VTS6 287 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 SMAD7O15105 426 aaKnown RBP10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 SIGLEC5O15389 551 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 SPRY1O43609 319 aaPredicted RBP10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 CD5LO43866 347 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 AIREO43918 545 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 ZNF205O95201 554 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 BPNT1O95861 308 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 PLATP00750 562 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 GYPAP02724 150 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 SMIM18P0DKX4 95 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 ADRA2CP18825 462 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 LMO1P25800 156 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 HTR2CP28335 458 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 RPL5P46777 297 aaKnown RBP10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 CAV3P56539 151 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 GNB2P62879 340 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 DGUOKQ16854 277 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 C22orf42Q6IC83 251 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 CROCCP3Q8IVE0 287 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 OR5D18Q8NGL1 313 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 OR13F1Q8NGS4 319 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 EMG1Q92979 244 aaKnown RBP10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 ORAI1Q96D31 301 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 MRI1Q9BV20 369 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 FAM192AQ9GZU8 254 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 ELL3Q9HB65 397 aaPredicted RBP10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 EXOSC4Q9NPD3 245 aaKnown RBP10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 SCOCQ9UIL1 159 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 ZNF222Q9UK12 451 aa10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 MRPS28Q9Y2Q9 187 aaKnown RBP10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 FLNAP21333 2647 aaKnown RBP10.53□□□□□ -0.72
SPTLC1-204ENST00000469778 IGKV1D-17A0A075B6S4 117 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 IGKV1-12A0A0C4DH73 117 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM90A10PA6NDY2 464 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM90A18PA6NE21 464 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM90A16PA6NEW6 464 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM90A20PA6NIJ5 464 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM90A8PA6NJQ4 464 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM90A7PA6NKC0 464 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM90A22PA8MWA6 464 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM90A12PA8MX19 464 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM90A5PA8MXJ8 464 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM90A23PA8MXZ1 464 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 J3QLI3 93 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 SLC17A2O00624 439 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 SLC22A1O15245 554 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 ANGPTL7O43827 346 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 IGKV1D-12P01611 117 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 TFAP2AP05549 437 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM90A15PP0C7V4 464 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM90A13PP0C7W8 464 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM90A14PP0C7W9 464 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM90A24PP0C7X0 464 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 IGHV4-31P0DP07 118 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 RAB3BP20337 219 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 BCL3P20749 454 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 GABRA2P47869 451 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 NPBWR2P48146 333 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 ALDH3B2P48448 385 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 IL13RA2Q14627 380 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 WDR25Q64LD2 544 aaPredicted RBP10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM166AQ6J272 317 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 ZNF841Q6ZN19 808 aa10.52□□□□□ -0.73
SPTLC1-204ENST00000469778 GLCCI1Q86VQ1 547 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms