RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 METTL9Q9H1A3 318 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 GCM1Q9NP62 436 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 HMG20AQ9NP66 347 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 FAIMQ9NVQ4 179 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 ADAM30Q9UKF2 790 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 TANC2Q9HCD6 1990 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 A0A1W2PP11 408 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 F8VVB4 439 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 F8VWA3 439 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 CTDSPLO15194 276 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 XRCC3O43542 346 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 SPRY1O43609 319 aaPredicted RBP6.87□□□□□ -1.31
NPHP3-204ENST00000469232 ANGPTL7O43827 346 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 CA11O75493 328 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 RHBDL1O75783 438 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 HLA-DQB1P01920 261 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 CHRM2P08172 466 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 OCMP0CE72 109 aaPredicted RBP6.87□□□□□ -1.31
NPHP3-204ENST00000469232 PAX1P15863 534 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 MGMTP16455 207 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 TNFSF4P23510 183 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 S100A5P33763 92 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 NPBWR2P48146 333 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 PTH2RP49190 550 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 TMEM50BP56557 158 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 SNRPD2P62316 118 aaKnown RBP6.87□□□□□ -1.31
NPHP3-204ENST00000469232 TNFAIP6P98066 277 aaPredicted RBP6.87□□□□□ -1.31
NPHP3-204ENST00000469232 ZNF79Q15937 498 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 SIGIRRQ6IA17 410 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 OR10K2Q6IF99 312 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 CNIH2Q6PI25 160 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 BAIAP2L2Q6UXY1 529 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 LINC00596Q86U02 117 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 OR4M1Q8NGD0 313 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 OR5D18Q8NGL1 313 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 ITLN1Q8WWA0 313 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 CEP19Q96LK0 163 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 TSC22D3Q99576 134 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 KCNK15Q9H427 330 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 FN3KRPQ9HA64 309 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 RASL12Q9NYN1 266 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 RCC2Q9P258 522 aaKnown RBP6.87□□□□□ -1.31
NPHP3-204ENST00000469232 LRBAP50851 2863 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 FBN2P35556 2912 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 GCN1Q92616 2671 aaKnown RBP6.87□□□□□ -1.31
NPHP3-204ENST00000469232 CLDN25C9JDP6 229 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 CDIPTO14735 213 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 TNFRSF13BO14836 293 aaPredicted RBP6.87□□□□□ -1.31
NPHP3-204ENST00000469232 SPRY3O43610 288 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 RP2O75695 350 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 GLAP06280 429 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 GTF2F2P13984 249 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 TNFRSF1AP19438 455 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 CD40LGP29965 261 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 RBM11P57052 281 aaKnown RBP6.87□□□□□ -1.31
NPHP3-204ENST00000469232 PAX5Q02548 391 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 MPV17LQ2QL34 196 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 SLC22A6Q4U2R8 563 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 PRAMEF6Q5VXH4 476 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 OSR2Q8N2R0 312 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 GCSAMQ8N6F7 178 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 S100A16Q96FQ6 103 aaKnown RBP6.87□□□□□ -1.31
NPHP3-204ENST00000469232 SDHCQ99643 169 aaPredicted RBP6.87□□□□□ -1.31
NPHP3-204ENST00000469232 GAL3ST1Q99999 423 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 URM1Q9BTM9 101 aaKnown RBP6.87□□□□□ -1.31
NPHP3-204ENST00000469232 TMEM59Q9BXS4 323 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 HSF4Q9ULV5 492 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 ING4Q9UNL4 249 aa6.87□□□□□ -1.31
NPHP3-204ENST00000469232 METTL21EPA6NDL7 271 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 TRAPPC2LH3BP13 241 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 H3BUI4 141 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 MFNGO00587 321 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 GSTZ1O43708 216 aaPredicted RBP6.86□□□□□ -1.31
NPHP3-204ENST00000469232 CYB5AP00167 134 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 KNG1P01042 644 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 GRPP07492 148 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 COX6B1P14854 86 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 BCL3P20749 454 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 CPT2P23786 658 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 CDK2P24941 298 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 LMO1P25800 156 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 CHATP28329 748 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 PPP5CP53041 499 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 ZNF846Q147U1 533 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 RSU1Q15404 277 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 SPIN3Q5JUX0 258 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 SHEQ5VZ18 495 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 TEX36Q5VZQ5 186 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 Q6P435 159 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 ACP7Q6ZNF0 438 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 ZNF826PQ6ZT77 177 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 FAM58AQ8N1B3 248 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 GAPTQ8N292 157 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 GDPD1Q8N9F7 314 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 OR56B1Q8NGI3 324 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 OR10R2Q8NGX6 335 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 C15orf40Q8WUR7 153 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 NEU4Q8WWR8 484 aaPredicted RBP6.86□□□□□ -1.31
NPHP3-204ENST00000469232 ST8SIA4Q92187 359 aa6.86□□□□□ -1.31
NPHP3-204ENST00000469232 FAM46BQ96A09 425 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms