RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 COL19A1Q14993 1142 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 SP6Q3SY56 376 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 FAHD2BQ6P2I3 314 aaPredicted RBP12.11□□□□□ -0.47
BRAT1-203ENST00000467558 SLC25A47Q6Q0C1 308 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 SSX9Q7RTT3 188 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 FAHD2AQ96GK7 314 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 ANXA10Q9UJ72 324 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 MRPS18BQ9Y676 258 aaKnown RBP12.11□□□□□ -0.47
BRAT1-203ENST00000467558 TRBV5-5A0A0J9YX44 114 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 C9orf170A2RU37 121 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 PRSS44E7EML9 344 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 H2AFB1P0C5Y9 115 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 FSTP19883 344 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 S100A7P31151 101 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 INO80CQ6PI98 192 aaPredicted RBP12.11□□□□□ -0.47
BRAT1-203ENST00000467558 ZNF519Q8TB69 540 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 SHARPINQ9H0F6 387 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 ERRFI1Q9UJM3 462 aaPredicted RBP12.11□□□□□ -0.47
BRAT1-203ENST00000467558 PCNTO95613 3336 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 ABCD4O14678 606 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 HEXAP06865 529 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 CALCRP30988 508 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 KCNJ3P48549 501 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 SUB1P53999 127 aaKnown RBP eCLIP12.11□□□□□ -0.47
BRAT1-203ENST00000467558 HES1Q14469 280 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 SURF2Q15527 256 aaPredicted RBP12.11□□□□□ -0.47
BRAT1-203ENST00000467558 ZNF239Q16600 458 aaKnown RBP12.11□□□□□ -0.47
BRAT1-203ENST00000467558 LINC01590Q5TEZ4 76 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 OR10P1Q8NGE3 313 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 FGF11Q92914 225 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 HGDQ93099 445 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 UHRF2Q96PU4 802 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 SF3B6Q9Y3B4 125 aaKnown RBP12.11□□□□□ -0.47
BRAT1-203ENST00000467558 CPN1P15169 458 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 ST8SIA2Q92186 375 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 S100PBPQ96BU1 408 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 TAAR6Q96RI8 345 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 MAGT1Q9H0U3 335 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 WDR13Q9H1Z4 485 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 CXXC4Q9H2H0 198 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 RAB27BO00194 218 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 BCL2L11O43521 198 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 RAB4BP61018 213 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 IFITM3Q01628 133 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 RIPPLY2Q5TAB7 128 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 ZNF574Q6ZN55 896 aaPredicted RBP12.1□□□□□ -0.47
BRAT1-203ENST00000467558 PPP1R32Q7Z5V6 425 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 RBMXL3Q8N7X1 1067 aaKnown RBP12.1□□□□□ -0.47
BRAT1-203ENST00000467558 OR5A2Q8NGI9 324 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 HPSE2Q8WWQ2 592 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 MRPL22Q9NWU5 206 aaKnown RBP12.1□□□□□ -0.47
BRAT1-203ENST00000467558 FZR1Q9UM11 496 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 TMEM229AB2RXF0 380 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 NKX2-8O15522 239 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 SEMA7AO75326 666 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 INHBBP09529 407 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 HIKESHIQ53FT3 197 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 BHLHA15Q7RTS1 189 aaPredicted RBP12.1□□□□□ -0.47
BRAT1-203ENST00000467558 ZNF485Q8NCK3 441 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 SLC7A10Q9NS82 523 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 TUBAL3A6NHL2 446 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 TRIM64BA6NI03 449 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 TRAF3IP2O43734 574 aaPredicted RBP12.1□□□□□ -0.47
BRAT1-203ENST00000467558 PNPP00491 289 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 KLF9Q13886 244 aaPredicted RBP12.1□□□□□ -0.47
BRAT1-203ENST00000467558 ZBTB37Q5TC79 503 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 FBXW5Q969U6 566 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 NIPSNAP3BQ9BS92 247 aa12.1□□□□□ -0.47
BRAT1-203ENST00000467558 STRAPQ9Y3F4 350 aaKnown RBP12.1□□□□□ -0.47
BRAT1-203ENST00000467558 PLXNA3P51805 1871 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 TGIF1Q15583 401 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 TRAT1Q6PIZ9 186 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 LRRC29Q8WV35 223 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 FAM117AQ9C073 453 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 ARV1Q9H2C2 271 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 TEX261Q6UWH6 196 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 ZNF426Q9BUY5 554 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 BIN3Q9NQY0 253 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 IL17BQ9UHF5 180 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 U3KQ87 197 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 CEP350Q5VT06 3117 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 IGLV3-12A0A075B6K2 115 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 NDUFB3O43676 98 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 SCAF4O95104 1147 aaKnown RBP12.09□□□□□ -0.47
BRAT1-203ENST00000467558 ISG15P05161 165 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 LIMK1P53667 647 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 PSG4Q00888 419 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 PDZK1IP1Q13113 114 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 TMEM182Q6ZP80 229 aaPredicted RBP12.09□□□□□ -0.47
BRAT1-203ENST00000467558 FAM122BQ7Z309 247 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 RELL2Q8NC24 303 aaPredicted RBP12.09□□□□□ -0.47
BRAT1-203ENST00000467558 UBALD1Q8TB05 177 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 COMMD5Q9GZQ3 224 aa12.09□□□□□ -0.47
BRAT1-203ENST00000467558 PARP12Q9H0J9 701 aaKnown RBP12.09□□□□□ -0.47
BRAT1-203ENST00000467558 J3QT63 122 aa12.08□□□□□ -0.47
BRAT1-203ENST00000467558 GEMIN2O14893 280 aaKnown RBP12.08□□□□□ -0.47
BRAT1-203ENST00000467558 CNIH1O95406 144 aa12.08□□□□□ -0.47
BRAT1-203ENST00000467558 CEACAM6P40199 344 aa12.08□□□□□ -0.47
BRAT1-203ENST00000467558 EFNB2P52799 333 aa12.08□□□□□ -0.47
BRAT1-203ENST00000467558 MPV17LQ2QL34 196 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms