RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 CD200P41217 278 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 POU3F4P49335 361 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 MMP15P51511 669 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 ART1P52961 327 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 MTCP1P56278 107 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 MRPS10P82664 201 aaKnown RBP4.65□□□□□ -1.67
VPS41-211ENST00000466017 PITPNAQ00169 270 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 IL24Q13007 206 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 PDZK1IP1Q13113 114 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 PRDX4Q13162 271 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 HLXQ14774 488 aaPredicted RBP4.65□□□□□ -1.67
VPS41-211ENST00000466017 ARL6IP1Q15041 203 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 EFNB3Q15768 340 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 NHLRC3Q5JS37 347 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 UBE2NLQ5JXB2 153 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 SPANXN2Q5MJ10 180 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 HES5Q5TA89 166 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 HACD4Q5VWC8 232 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 OR2T2Q6IF00 324 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 MKXQ8IYA7 352 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 ZDHHC23Q8IYP9 409 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 JAGN1Q8N5M9 183 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 OR51D1Q8NGF3 324 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 OR4D6Q8NGJ1 314 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 OR5H6Q8NGV6 325 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 ZNF671Q8TAW3 534 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 TRMT10AQ8TBZ6 339 aaKnown RBP4.65□□□□□ -1.67
VPS41-211ENST00000466017 DEDD2Q8WXF8 326 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 ERGIC1Q969X5 290 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 MRPL24Q96A35 216 aaKnown RBP4.65□□□□□ -1.67
VPS41-211ENST00000466017 DIRAS2Q96HU8 199 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 RNF170Q96K19 258 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 CEP19Q96LK0 163 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 C1orf147Q96MC9 270 aaPredicted RBP4.65□□□□□ -1.67
VPS41-211ENST00000466017 MICU1Q9BPX6 476 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 URM1Q9BTM9 101 aaKnown RBP4.65□□□□□ -1.67
VPS41-211ENST00000466017 C6orf62Q9GZU0 229 aaPredicted RBP4.65□□□□□ -1.67
VPS41-211ENST00000466017 TLNRD1Q9H1K6 362 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 OR51I2Q9H344 312 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 PLK3Q9H4B4 646 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 CXorf56Q9H5V9 222 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.65□□□□□ -1.67
VPS41-211ENST00000466017 DIABLOQ9NR28 239 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 GPR173Q9NS66 373 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 NKIRAS2Q9NYR9 191 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 ZDHHC8Q9ULC8 765 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 LAMA5O15230 3695 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 SPTA1P02549 2419 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 IGKV1-27A0A075B6S5 117 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 TMEM272A0A1B0GTI8 110 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.64□□□□□ -1.67
VPS41-211ENST00000466017 LRP5LA4QPB2 252 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 CLEC18AA5D8T8 446 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 NKX2-6A6NCS4 301 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 A6NIN4 97 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 FOXI3A8MTJ6 420 aaPredicted RBP4.64□□□□□ -1.67
VPS41-211ENST00000466017 SHISA9B4DS77 424 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 ZNF732B4DXR9 585 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 H3BSH0 61 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 RAB27BO00194 218 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 RGS5O15539 181 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 XRCC3O43542 346 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 GSTZ1O43708 216 aaPredicted RBP4.64□□□□□ -1.67
VPS41-211ENST00000466017 HPGDSO60760 199 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 ZG16O60844 167 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 CA11O75493 328 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 CTAG2O75638 210 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 KDM4BO94953 1096 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 FSTL3O95633 263 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 HLA-DQB1P01920 261 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 GLAP06280 429 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 OCMP0CE72 109 aaPredicted RBP4.64□□□□□ -1.67
VPS41-211ENST00000466017 ELK1P19419 428 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 TALDO1P37837 337 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 MPV17P39210 176 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 UQCRFS1P47985 274 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 PITPNBP48739 271 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 FABP6P51161 128 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 KLF3P57682 345 aaPredicted RBP4.64□□□□□ -1.67
VPS41-211ENST00000466017 ERVS71-1P61550 626 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 SSBP1Q04837 148 aaKnown RBP4.64□□□□□ -1.67
VPS41-211ENST00000466017 SNTB2Q13425 540 aaKnown RBP4.64□□□□□ -1.67
VPS41-211ENST00000466017 GFOD2Q3B7J2 385 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 PLCXD3Q63HM9 321 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 GLIPR1L1Q6UWM5 242 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 CLEC18BQ6UXF7 455 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 Q8IYB0 196 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 SAMD12Q8N8I0 201 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 CLEC18CQ8NCF0 446 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 OR51T1Q8NGJ9 327 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 OR10Z1Q8NGY1 313 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 LGALS14Q8TCE9 139 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 HPSE2Q8WWQ2 592 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 SLC25A38Q96DW6 304 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 GPER1Q99527 375 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 S100A13Q99584 98 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 DHRS9Q9BPW9 319 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 RTL8AQ9BWD3 113 aa4.64□□□□□ -1.67
VPS41-211ENST00000466017 PAPOLGQ9BWT3 736 aaKnown RBP4.64□□□□□ -1.67
VPS41-211ENST00000466017 SRRQ9GZT4 340 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms