RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 AJUBAQ96IF1 538 aa17.78■□□□□ 0.44
LIME1-203ENST00000465591 MMP24Q9Y5R2 645 aa17.78■□□□□ 0.44
LIME1-203ENST00000465591 MEIOCA2RUB1 952 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 SNTNA6NMZ2 147 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 E9PI62 339 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 K7N7A8 449 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 RRP9O43818 475 aaKnown RBP17.77■□□□□ 0.44
LIME1-203ENST00000465591 ZNF737O75373 536 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 SERPINA3P01011 423 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 FBP1P09467 338 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 PIPP12273 146 aaPredicted RBP17.77■□□□□ 0.44
LIME1-203ENST00000465591 ATF1P18846 271 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 NPBWR2P48146 333 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 ALKBH1Q13686 389 aaKnown RBP17.77■□□□□ 0.44
LIME1-203ENST00000465591 BLMHQ13867 455 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 CNN3Q15417 329 aaKnown RBP17.77■□□□□ 0.44
LIME1-203ENST00000465591 NCR3LG1Q68D85 454 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 UTS2BQ765I0 119 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 DNAAF1Q8NEP3 725 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 OR52I1Q8NGK6 324 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 SGMS2Q8NHU3 365 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 DYRK2Q92630 601 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 ERVK13-1Q9NX77 482 aa17.77■□□□□ 0.44
LIME1-203ENST00000465591 TMEM82A0PJX8 343 aa17.76■□□□□ 0.43
LIME1-203ENST00000465591 MEX3AA1L020 520 aaKnown RBP17.76■□□□□ 0.43
LIME1-203ENST00000465591 POM121CA8CG34 1229 aa17.76■□□□□ 0.43
LIME1-203ENST00000465591 MPZL2O60487 215 aa17.76■□□□□ 0.43
LIME1-203ENST00000465591 WBP4O75554 376 aaKnown RBP17.76■□□□□ 0.43
LIME1-203ENST00000465591 NDUFA7O95182 113 aa17.76■□□□□ 0.43
LIME1-203ENST00000465591 CRYBA1P05813 215 aa17.76■□□□□ 0.43
LIME1-203ENST00000465591 AZGP1P25311 298 aaKnown RBP17.76■□□□□ 0.43
LIME1-203ENST00000465591 POU3F4P49335 361 aa17.76■□□□□ 0.43
LIME1-203ENST00000465591 ACTA2P62736 377 aa17.76■□□□□ 0.43
LIME1-203ENST00000465591 ACTG2P63267 376 aa17.76■□□□□ 0.43
LIME1-203ENST00000465591 SRSF4Q08170 494 aaKnown RBP17.76■□□□□ 0.43
LIME1-203ENST00000465591 SMN1Q16637 294 aaKnown RBP17.76■□□□□ 0.43
LIME1-203ENST00000465591 CRIP3Q6Q6R5 217 aa17.76■□□□□ 0.43
LIME1-203ENST00000465591 ASCC1Q8N9N2 400 aaKnown RBP17.76■□□□□ 0.43
LIME1-203ENST00000465591 OR5D13Q8NGL4 314 aa17.76■□□□□ 0.43
LIME1-203ENST00000465591 FAM234AQ9H0X4 552 aa17.76■□□□□ 0.43
LIME1-203ENST00000465591 RBFOX1Q9NWB1 397 aaKnown RBP17.76■□□□□ 0.43
LIME1-203ENST00000465591 HHLA2Q9UM44 414 aa17.76■□□□□ 0.43
LIME1-203ENST00000465591 SPRY1O43609 319 aaPredicted RBP17.75■□□□□ 0.43
LIME1-203ENST00000465591 ANGPTL7O43827 346 aa17.75■□□□□ 0.43
LIME1-203ENST00000465591 CALCBP10092 127 aa17.75■□□□□ 0.43
LIME1-203ENST00000465591 ZNF20P17024 532 aa17.75■□□□□ 0.43
LIME1-203ENST00000465591 BCL3P20749 454 aa17.75■□□□□ 0.43
LIME1-203ENST00000465591 PAX6P26367 422 aa17.75■□□□□ 0.43
LIME1-203ENST00000465591 RBP2P50120 134 aa17.75■□□□□ 0.43
LIME1-203ENST00000465591 ATP1B3P54709 279 aa17.75■□□□□ 0.43
LIME1-203ENST00000465591 DLX6P56179 175 aa17.75■□□□□ 0.43
LIME1-203ENST00000465591 EGFL6Q8IUX8 553 aa17.75■□□□□ 0.43
LIME1-203ENST00000465591 SYS1Q8N2H4 156 aa17.75■□□□□ 0.43
LIME1-203ENST00000465591 PACRGLQ8N7B6 248 aa17.75■□□□□ 0.43
LIME1-203ENST00000465591 EMG1Q92979 244 aaKnown RBP17.75■□□□□ 0.43
LIME1-203ENST00000465591 RFT1Q96AA3 541 aa17.75■□□□□ 0.43
LIME1-203ENST00000465591 Q96MT0 163 aa17.75■□□□□ 0.43
LIME1-203ENST00000465591 SPACA5Q96QH8 159 aa17.75■□□□□ 0.43
LIME1-203ENST00000465591 MRPS18AQ9NVS2 196 aaKnown RBP17.75■□□□□ 0.43
LIME1-203ENST00000465591 CAB39Q9Y376 341 aaPredicted RBP17.75■□□□□ 0.43
LIME1-203ENST00000465591 KIAA2026Q5HYC2 2103 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 IGKV1-12A0A0C4DH73 117 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 CLIC3O95833 236 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 FADS2O95864 444 aaKnown RBP17.74■□□□□ 0.43
LIME1-203ENST00000465591 IGKV1D-12P01611 117 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 CHRM2P08172 466 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 DUSP1P28562 367 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 MTCP1P56278 107 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 SLC34A1Q06495 639 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 ACSM1Q08AH1 577 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 RAB40BQ12829 278 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 TCF23Q7RTU1 214 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 ZNF676Q8N7Q3 588 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 OR13C3Q8NGS6 347 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 OR13C9Q8NGT0 318 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 OR4F5Q8NH21 305 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 RDH12Q96NR8 316 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 DPAGT1Q9H3H5 408 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 SMPD3Q9NY59 655 aaPredicted RBP17.74■□□□□ 0.43
LIME1-203ENST00000465591 SF3B6Q9Y3B4 125 aaKnown RBP17.74■□□□□ 0.43
LIME1-203ENST00000465591 WNK1Q9H4A3 2382 aa17.74■□□□□ 0.43
LIME1-203ENST00000465591 CASQ2O14958 399 aaPredicted RBP17.73■□□□□ 0.43
LIME1-203ENST00000465591 ZFPL1O95159 310 aa17.73■□□□□ 0.43
LIME1-203ENST00000465591 LIMS3P0CW19 117 aa17.73■□□□□ 0.43
LIME1-203ENST00000465591 LIMS4P0CW20 117 aa17.73■□□□□ 0.43
LIME1-203ENST00000465591 PRKACBP22694 351 aa17.73■□□□□ 0.43
LIME1-203ENST00000465591 LRRC36Q1X8D7 754 aa17.73■□□□□ 0.43
LIME1-203ENST00000465591 LPCAT4Q643R3 524 aa17.73■□□□□ 0.43
LIME1-203ENST00000465591 ZNF782Q6ZMW2 699 aaPredicted RBP17.73■□□□□ 0.43
LIME1-203ENST00000465591 C17orf107Q6ZR85 190 aa17.73■□□□□ 0.43
LIME1-203ENST00000465591 OR52N4Q8NGI2 321 aa17.73■□□□□ 0.43
LIME1-203ENST00000465591 WFDC12Q8WWY7 111 aa17.73■□□□□ 0.43
LIME1-203ENST00000465591 OPALINQ96PE5 141 aa17.73■□□□□ 0.43
LIME1-203ENST00000465591 PDCD1LG2Q9BQ51 273 aa17.73■□□□□ 0.43
LIME1-203ENST00000465591 SLITRK2Q9H156 845 aa17.73■□□□□ 0.43
LIME1-203ENST00000465591 BEX1Q9HBH7 125 aa17.73■□□□□ 0.43
LIME1-203ENST00000465591 RPL36Q9Y3U8 105 aaKnown RBP17.73■□□□□ 0.43
LIME1-203ENST00000465591 TRBV2A0A0J9YWF9 115 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 HAND1O96004 215 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 PAHP00439 452 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms