RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 TBPP20226 339 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 IGHV1-2P23083 117 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 TUBG1P23258 451 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 ANOS1P23352 680 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 CPT2P23786 658 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 RCVRNP35243 200 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 SRP9P49458 86 aaKnown RBP11.79□□□□□ -0.52
HDAC6-215ENST00000465457 ATP1B3P54709 279 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 FOXG1P55316 489 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-215ENST00000465457 MTCP1P56278 107 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 TAS2R19P59542 299 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 GABRA6Q16445 453 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 TATDN3Q17R31 274 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 PNLIPRP3Q17RR3 467 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 PCGF3Q3KNV8 242 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 ZNF672Q499Z4 452 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-215ENST00000465457 HIKESHIQ53FT3 197 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 BEND4Q6ZU67 534 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 BTN2A1Q7KYR7 527 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 PAQR4Q8N4S7 273 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-215ENST00000465457 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-215ENST00000465457 SLC30A7Q8NEW0 376 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 OR10R2Q8NGX6 335 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 OR56B4Q8NH76 319 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 UBASH3BQ8TF42 649 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 AQP3Q92482 292 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 S100PBPQ96BU1 408 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 UPRTQ96BW1 309 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 C1orf147Q96MC9 270 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-215ENST00000465457 KCNK15Q9H427 330 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 HRASLSQ9HDD0 168 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 TUBG2Q9NRH3 451 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 EIF3KQ9UBQ5 218 aaKnown RBP11.79□□□□□ -0.52
HDAC6-215ENST00000465457 KLK11Q9UBX7 282 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 LPAR3Q9UBY5 353 aa11.79□□□□□ -0.52
HDAC6-215ENST00000465457 RAB27BO00194 218 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 PRAF2O60831 178 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 CRTAPO75718 401 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-215ENST00000465457 MPIG6BO95866 241 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 AKAIN1P0CW23 69 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 GIFP27352 417 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 CBX5P45973 191 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 RAB25P57735 213 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 RPS27AP62979 156 aaKnown RBP11.78□□□□□ -0.52
HDAC6-215ENST00000465457 PPA1Q15181 289 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 FAM120AOSQ5T036 256 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 NCMAPQ5T1S8 102 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 MDP1Q86V88 176 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 ZNF584Q8IVC4 421 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 C1orf174Q8IYL3 243 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 ZNF525Q8N782 197 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 ZSCAN4Q8NAM6 433 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-215ENST00000465457 TMEM229BQ8NBD8 167 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 MRPS24Q96EL2 167 aaKnown RBP11.78□□□□□ -0.52
HDAC6-215ENST00000465457 TM2D1Q9BX74 207 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 METTL9Q9H1A3 318 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 LPAR5Q9H1C0 372 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 CDH20Q9HBT6 801 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 NOX3Q9HBY0 568 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.78□□□□□ -0.52
HDAC6-215ENST00000465457 GPR173Q9NS66 373 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 NUDT15Q9NV35 164 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 IL36GQ9NZH8 169 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 AMDHD2Q9Y303 409 aa11.78□□□□□ -0.52
HDAC6-215ENST00000465457 NOP16Q9Y3C1 178 aaKnown RBP11.78□□□□□ -0.52
HDAC6-215ENST00000465457 ZNF503-AS2A6NEH8 195 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 CA11O75493 328 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 RAD51DO75771 328 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 CYB5AP00167 134 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 MT-ND4P03905 459 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 CD3EP07766 207 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 CBR1P16152 277 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 ZNF14P17017 642 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-215ENST00000465457 EGR1P18146 543 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 PSMB1P20618 241 aaKnown RBP11.77□□□□□ -0.53
HDAC6-215ENST00000465457 CCNOP22674 350 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 ZP1P60852 638 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 BSPH1Q075Z2 132 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 LOXL1Q08397 574 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-215ENST00000465457 GK2Q14410 553 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-215ENST00000465457 MEF2DQ14814 521 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 ZMYND11Q15326 602 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 ZNF260Q3ZCT1 412 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 PLCXD3Q63HM9 321 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 OR10K2Q6IF99 312 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 ASCL4Q6XD76 172 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 Q6ZTK2 550 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 FAM89BQ8N5H3 189 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 FAM169BQ8N8A8 192 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 PXT1Q8NFP0 134 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 RAB3CQ96E17 227 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 SEH1LQ96EE3 360 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 ZNF75AQ96N20 296 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 ING4Q9UNL4 249 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 MPC1Q9Y5U8 109 aa11.77□□□□□ -0.53
HDAC6-215ENST00000465457 SERPINE3A8MV23 424 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 H3BUI4 141 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 AKR7A2O43488 359 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 CSTBP04080 98 aaKnown RBP11.76□□□□□ -0.53
HDAC6-215ENST00000465457 H2AFB2P0C5Z0 115 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms