RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 NPFFR1Q9GZQ6 430 aa11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 MTCH1Q9NZJ7 389 aa11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 TBL2Q9Y4P3 447 aaKnown RBP11.65□□□□□ -0.54
SNRNP40-203ENST00000463988 IGKV1-27A0A075B6S5 117 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 CSF1P09603 554 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 UBCP0CG48 685 aaKnown RBP11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 ZNF728P0DKX0 622 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 COX7A1P24310 79 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 BMXP51813 675 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 CDC42P60953 191 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 ODF4Q2M2E3 257 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 GDPD3Q7L5L3 318 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 Q8IYB0 196 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 ENTHD1Q8IYW4 607 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 OR8H2Q8N162 312 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 BATF2Q8N1L9 274 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 PRSS35Q8N3Z0 413 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 OR11H6Q8NGC7 330 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 OR13D1Q8NGV5 346 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 CFHR4Q92496 578 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 FOXRED1Q96CU9 486 aaPredicted RBP11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 MALSU1Q96EH3 234 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 BORCS8Q96FH0 119 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 SNX22Q96L94 193 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 RIBC2Q9H4K1 309 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 OAZ3Q9UMX2 235 aa11.64□□□□□ -0.55
SNRNP40-203ENST00000463988 LOC107986453A0A1B0GWG9 222 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 ODF3BA8MYP8 253 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 F8VVB4 439 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 F8VWA3 439 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 APOL3O95236 402 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 PIPP12273 146 aaPredicted RBP11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 RBP2P50120 134 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 CNN3Q15417 329 aaKnown RBP11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 SLC25A30Q5SVS4 291 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 TMEM244Q5VVB8 128 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 ZNF626Q68DY1 528 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 ZNF782Q6ZMW2 699 aaPredicted RBP11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 SLC25A26Q70HW3 274 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 FAM220AQ7Z4H9 259 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 KCTD20Q7Z5Y7 419 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 EGFL6Q8IUX8 553 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 SLAMF9Q96A28 289 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 RNF166Q96A37 237 aaPredicted RBP11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 SIGLEC9Q9Y336 463 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 TET2Q6N021 2002 aaPredicted RBP11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 DSCAML1Q8TD84 2053 aa11.63□□□□□ -0.55
SNRNP40-203ENST00000463988 hADV38S2A0JD32 116 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 TMEM82A0PJX8 343 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 MEGF11A6BM72 1044 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 CHST1O43916 411 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 IGHV1-8P0DP01 117 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 PAX6P26367 422 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 KIR3DL2P43630 455 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 ATP1B3P54709 279 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 EDDM3BP56851 147 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 ZNF85Q03923 595 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 FDX2Q6P4F2 183 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 UTS2BQ765I0 119 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 LHFPL4Q7Z7J7 247 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 Q8N2B8 174 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 OR2G2Q8NGZ5 317 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 FAM110DQ8TAY7 271 aaPredicted RBP11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 GNG8Q9UK08 70 aa11.62□□□□□ -0.55
SNRNP40-203ENST00000463988 TRBV2A0A0J9YWF9 115 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 H3BSH0 61 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 CIB2O75838 187 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 HAND1O96004 215 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 CYB5AP00167 134 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 ARG1P05089 322 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 ISG15P05161 165 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 PRKACBP22694 351 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 PEX2P28328 305 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 DYNLT3P51808 116 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 SNRPGP62308 76 aaKnown RBP11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 ACTC1P68032 377 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 ACTA1P68133 377 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 ZNF146Q15072 292 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 TP53I3Q53FA7 332 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 MEDAGQ5VYS4 303 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 DYNAPQ8N1N2 210 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 KLHDC1Q8N7A1 406 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 RPS4Y2Q8TD47 263 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 EMG1Q92979 244 aaKnown RBP11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 HRASLS5Q96KN8 279 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 ZNF714Q96N38 554 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 ABCB10Q9NRK6 738 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 IMPAD1Q9NX62 359 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 PITPNC1Q9UKF7 332 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 TCF19Q9Y242 345 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 LINC00312Q9Y6C7 94 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 NOTCH3Q9UM47 2321 aa11.61□□□□□ -0.55
SNRNP40-203ENST00000463988 PRKDCP78527 4128 aaKnown RBP11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 IGKV1-9A0A0C4DH69 117 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 A6NDX4 124 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 SAC3D1A6NKF1 404 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 J3QRE1 110 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 ALPLP05186 524 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 ERP29P30040 261 aaKnown RBP11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 CCR9P51686 369 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms