RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 NRIP2Q9BQI9 281 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 MRI1Q9BV20 369 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 MRPS26Q9BYN8 205 aaKnown RBP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 CST11Q9H112 138 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 PLGRKTQ9HBL7 147 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 YAE1D1Q9NRH1 226 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 DCAF16Q9NXF7 216 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 KAAG1Q9UBP8 84 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 GHRLQ9UBU3 117 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 ING4Q9UNL4 249 aa5.34□□□□□ -1.55
SF3B1-206ENST00000462613 MRPS28Q9Y2Q9 187 aaKnown RBP5.34□□□□□ -1.55
SF3B1-206ENST00000462613 ACANP16112 2415 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 ABCA2Q9BZC7 2435 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 IGKV1-27A0A075B6S5 117 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 TRAV8-7A0A075B6U6 113 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 LOC105371242A0A075B767 164 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 A0A096LNT2 108 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 PPIAL4CA0A0B4J2A2 164 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 hCG_1809904A0A1W2PP81 198 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 A0A1W2PPE2 198 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 A0A1W2PR64 198 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 A0A1W2PRV1 198 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 RFPL4AA6NLU0 287 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 A8MXK9 166 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 RFPL4AL1F8VTS6 287 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 J3QLI3 93 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 WNT9BO14905 357 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 ANGPTL7O43827 346 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 NOL3O60936 208 aaKnown RBP5.33□□□□□ -1.56
SF3B1-206ENST00000462613 SC5DO75845 299 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 LIPFP07098 398 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 CHRM2P08172 466 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 WNT2P09544 360 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 IGHV4-31P0DP07 118 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 PSG2P11465 335 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 GTF2F2P13984 249 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 ZNF44P15621 663 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 NDUFB7P17568 137 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 PRKACAP17612 351 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 BCL3P20749 454 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 SERPINA2P20848 420 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 FGF9P31371 208 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-206ENST00000462613 PRDX2P32119 198 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 LMO4P61968 165 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 LCN2P80188 198 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 FABP5Q01469 135 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 IKZF1Q13422 519 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 BLMHQ13867 455 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 ATPAF1Q5TC12 328 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-206ENST00000462613 WDR25Q64LD2 544 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-206ENST00000462613 STUMQ69YW2 141 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 GDPGP1Q6ZNW5 385 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 GDPD3Q7L5L3 318 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 LINC00596Q86U02 117 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 CMTM4Q8IZR5 234 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 CHST4Q8NCG5 386 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 OR5T2Q8NGG2 359 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 OR6M1Q8NGM8 313 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 ANGPTL6Q8NI99 470 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 TBC1D15Q8TC07 691 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 ST8SIA4Q92187 359 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 H1FXQ92522 213 aaKnown RBP5.33□□□□□ -1.56
SF3B1-206ENST00000462613 MUL1Q969V5 352 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 MSI2Q96DH6 328 aaKnown RBP5.33□□□□□ -1.56
SF3B1-206ENST00000462613 MRPS24Q96EL2 167 aaKnown RBP5.33□□□□□ -1.56
SF3B1-206ENST00000462613 KCTD7Q96MP8 289 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 CCL13Q99616 98 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 FGF23Q9GZV9 251 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-206ENST00000462613 SHARPINQ9H0F6 387 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 FAM234AQ9H0X4 552 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 WDR13Q9H1Z4 485 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 LPAR2Q9HBW0 351 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 HES4Q9HCC6 221 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 HIF1ANQ9NWT6 349 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 MTCH1Q9NZJ7 389 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 SLC25A10Q9UBX3 287 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-206ENST00000462613 LPAR3Q9UBY5 353 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 SCOCQ9UIL1 159 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 HIVEP2P31629 2446 aa5.33□□□□□ -1.56
SF3B1-206ENST00000462613 OTOGQ6ZRI0 2925 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 CSMD2Q7Z408 3487 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 TRBV23-1A0A0A0MS06 115 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 TRAV1-2A0A0B4J238 106 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 LOC100506127A0A0U1RQW1 187 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 A0A1W2PQ09 198 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 FAM157AC9JC47 383 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 F5H0A9 414 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-206ENST00000462613 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-206ENST00000462613 DVL1O14640 695 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 SIGLEC5O15389 551 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 AIREO43918 545 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 BPNT1O95861 308 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 LY6G6DO95868 133 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 HAND1O96004 215 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 JUNBP17275 347 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-206ENST00000462613 RAB3BP20337 219 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 GABRR1P24046 479 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 HTR2CP28335 458 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 IL2RGP31785 369 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 OR3A4PP47883 348 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms