RNA–Protein interactions for RNA: ENST00000461983.5

C1S-209, Transcript of complement C1s, human

TSL 2

Gene C1S, Length 950 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1S-209	ENST00000461983	EIF4E	P06730	217 aa	Known RBP	13.08	□□□□□ -0.32
C1S-209	ENST00000461983	BCL3	P20749	454 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	GLRA1	P23415	457 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	PMEL	P40967	661 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	RBM11	P57052	281 aa	Known RBP	13.08	□□□□□ -0.32
C1S-209	ENST00000461983	ERVK11-1	P61568	191 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	PRAMEF6	Q5VXH4	476 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	C11orf53	Q8IXP5	236 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	GDPD1	Q8N9F7	314 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	CHST4	Q8NCG5	386 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	OR10R2	Q8NGX6	335 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	LRRC29	Q8WV35	223 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	EMG1	Q92979	244 aa	Known RBP	13.08	□□□□□ -0.32
C1S-209	ENST00000461983	SLC25A38	Q96DW6	304 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983		Q96M66	194 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	LPAR5	Q9H1C0	372 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	HES4	Q9HCC6	221 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.08	□□□□□ -0.32
C1S-209	ENST00000461983	UFSP2	Q9NUQ7	469 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	HSF4	Q9ULV5	492 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	LAMP3	Q9UQV4	416 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	PRR14L	Q5THK1	2151 aa		13.08	□□□□□ -0.32
C1S-209	ENST00000461983	HELZ2	Q9BYK8	2649 aa	Known RBP	13.07	□□□□□ -0.32
C1S-209	ENST00000461983	IGKV1-12	A0A0C4DH73	117 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	IGHV1-69-2	A0A0G2JMI3	117 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	SRRM5	B3KS81	715 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	CTDSPL	O15194	276 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	IGKV1D-12	P01611	117 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	CD8A	P01732	235 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	SFTPB	P07988	381 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	GSTP1	P09211	210 aa	Known RBP	13.07	□□□□□ -0.32
C1S-209	ENST00000461983	MUC1	P15941	1255 aa	Predicted RBP	13.07	□□□□□ -0.32
C1S-209	ENST00000461983	PRKACA	P17612	351 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	PPP5C	P53041	499 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	IL18	Q14116	193 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	RBM39	Q14498	530 aa	Known RBP	13.07	□□□□□ -0.32
C1S-209	ENST00000461983	ZNF146	Q15072	292 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	MPPED2	Q15777	294 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	MICB	Q29980	383 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	TMEM104	Q8NE00	496 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	GTF3A	Q92664	365 aa	Known RBP	13.07	□□□□□ -0.32
C1S-209	ENST00000461983	RDH5	Q92781	318 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	RAB3C	Q96E17	227 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	PSMG3-AS1	Q96PY0	264 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	CACNG6	Q9BXT2	260 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	BANF2	Q9H503	90 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	IFT22	Q9H7X7	185 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	PLEKHF2	Q9H8W4	249 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	AKIP1	Q9NQ31	210 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	DNAJB11	Q9UBS4	358 aa		13.07	□□□□□ -0.32
C1S-209	ENST00000461983	USP9X	Q93008	2570 aa	Predicted RBP	13.06	□□□□□ -0.32
C1S-209	ENST00000461983	TRAV38-1	A0A0B4J264	116 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	POM121C	A8CG34	1229 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	SERPINE3	A8MV23	424 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	SULT1C2	O00338	296 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	NDUFA2	O43678	99 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	CA11	O75493	328 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	RHBDL1	O75783	438 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	LHB	P01229	141 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	SOD3	P08294	240 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	FUT3	P21217	361 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	CDK2	P24941	298 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	BLVRB	P30043	206 aa	Predicted RBP	13.06	□□□□□ -0.32
C1S-209	ENST00000461983	NPBWR2	P48146	333 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	VEGFC	P49767	419 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	MRPS15	P82914	257 aa	Known RBP	13.06	□□□□□ -0.32
C1S-209	ENST00000461983	PNLIPRP3	Q17RR3	467 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	HACD4	Q5VWC8	232 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	OR10K2	Q6IF99	312 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983		Q6ZTK2	550 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	RNF144B	Q7Z419	303 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	OR4M1	Q8NGD0	313 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	OR10K1	Q8NGX5	313 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	PPP1R35	Q8TAP8	253 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	SOST	Q9BQB4	213 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	CCDC32	Q9BV29	185 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	SCPEP1	Q9HB40	452 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	BARX1	Q9HBU1	254 aa	Predicted RBP	13.06	□□□□□ -0.32
C1S-209	ENST00000461983	PLEKHJ1	Q9NW61	149 aa		13.06	□□□□□ -0.32
C1S-209	ENST00000461983	RBFOX1	Q9NWB1	397 aa	Known RBP	13.06	□□□□□ -0.32
C1S-209	ENST00000461983	MRPS7	Q9Y2R9	242 aa	Known RBP	13.06	□□□□□ -0.32
C1S-209	ENST00000461983	TRAV18	A0A075B6X5	111 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983		H7C1Q1	480 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983	RAB27B	O00194	218 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983	DEGS1	O15121	323 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983	PDCD6	O75340	191 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983	OR7C1	O76099	320 aa	Predicted RBP	13.05	□□□□□ -0.32
C1S-209	ENST00000461983	F12	P00748	615 aa	Predicted RBP	13.05	□□□□□ -0.32
C1S-209	ENST00000461983	KCNJ3	P48549	501 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983	EFNA4	P52798	201 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983	EFNB2	P52799	333 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983	TAS2R20	P59543	309 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983	PYDC2	Q56P42	97 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983	ACP7	Q6ZNF0	438 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983	FCAMR	Q8WWV6	532 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983	TIMD4	Q96H15	378 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983	CCL19	Q99731	98 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983	NKX3-1	Q99801	234 aa	Predicted RBP	13.05	□□□□□ -0.32
C1S-209	ENST00000461983	DNTTIP1	Q9H147	329 aa		13.05	□□□□□ -0.32
C1S-209	ENST00000461983	RIMS4	Q9H426	269 aa	Predicted RBP	13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 113 ms