RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 SLAMF9Q96A28 289 aa15.42■□□□□ 0.06
VARS-220ENST00000461874 BORCS8Q96FH0 119 aa15.42■□□□□ 0.06
VARS-220ENST00000461874 SSX3Q99909 188 aa15.42■□□□□ 0.06
VARS-220ENST00000461874 DAPL1A0PJW8 107 aa15.41■□□□□ 0.06
VARS-220ENST00000461874 H3BUX3 64 aa15.41■□□□□ 0.06
VARS-220ENST00000461874 SLC16A6O15403 523 aa15.41■□□□□ 0.06
VARS-220ENST00000461874 DLX6P56179 175 aa15.41■□□□□ 0.06
VARS-220ENST00000461874 OR12D2P58182 307 aa15.41■□□□□ 0.06
VARS-220ENST00000461874 CNN3Q15417 329 aaKnown RBP15.41■□□□□ 0.06
VARS-220ENST00000461874 AANATQ16613 207 aa15.41■□□□□ 0.06
VARS-220ENST00000461874 FDX2Q6P4F2 183 aa15.41■□□□□ 0.06
VARS-220ENST00000461874 EGFL6Q8IUX8 553 aa15.41■□□□□ 0.06
VARS-220ENST00000461874 CBR4Q8N4T8 237 aa15.41■□□□□ 0.06
VARS-220ENST00000461874 ASCC1Q8N9N2 400 aaKnown RBP15.41■□□□□ 0.06
VARS-220ENST00000461874 DNAAF1Q8NEP3 725 aa15.41■□□□□ 0.06
VARS-220ENST00000461874 ADAT3Q96EY9 351 aaPredicted RBP15.41■□□□□ 0.06
VARS-220ENST00000461874 FRRS1LQ9P0K9 344 aa15.41■□□□□ 0.06
VARS-220ENST00000461874 IGKV1-9A0A0C4DH69 117 aa15.4■□□□□ 0.06
VARS-220ENST00000461874 C17orf98A8MV24 154 aa15.4■□□□□ 0.06
VARS-220ENST00000461874 INMTO95050 263 aa15.4■□□□□ 0.06
VARS-220ENST00000461874 ISG15P05161 165 aa15.4■□□□□ 0.06
VARS-220ENST00000461874 PIPP12273 146 aaPredicted RBP15.4■□□□□ 0.06
VARS-220ENST00000461874 COX7A1P24310 79 aa15.4■□□□□ 0.06
VARS-220ENST00000461874 RBP2P50120 134 aa15.4■□□□□ 0.06
VARS-220ENST00000461874 ATP1B3P54709 279 aa15.4■□□□□ 0.06
VARS-220ENST00000461874 NANOS3P60323 173 aaKnown RBP15.4■□□□□ 0.06
VARS-220ENST00000461874 LRRC75BQ2VPJ9 315 aa15.4■□□□□ 0.06
VARS-220ENST00000461874 CCDC121Q6ZUS5 278 aa15.4■□□□□ 0.06
VARS-220ENST00000461874 UTS2BQ765I0 119 aa15.4■□□□□ 0.06
VARS-220ENST00000461874 PPA2Q9H2U2 334 aa15.4■□□□□ 0.06
VARS-220ENST00000461874 SEBOXQ9HB31 216 aaPredicted RBP15.4■□□□□ 0.06
VARS-220ENST00000461874 VWFP04275 2813 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 TMEM82A0PJX8 343 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 SNTNA6NMZ2 147 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 M0QZ24 198 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 TIMM23O14925 209 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 ATF1P18846 271 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 CCR9P51686 369 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 BMXP51813 675 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 ASPHD2Q6ICH7 369 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 SLC35E4Q6ICL7 350 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 ZNF782Q6ZMW2 699 aaPredicted RBP15.39■□□□□ 0.05
VARS-220ENST00000461874 Q8IYB0 196 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 ACBD7Q8N6N7 88 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 FGGYQ96C11 551 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 SNX22Q96L94 193 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 MBOAT4Q96T53 435 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 AASSQ9UDR5 926 aa15.39■□□□□ 0.05
VARS-220ENST00000461874 EXOGQ9Y2C4 368 aaKnown RBP15.39■□□□□ 0.05
VARS-220ENST00000461874 KCNAB3O43448 404 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 HTR1AP08908 422 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 ZNF728P0DKX0 622 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 GABRB1P18505 474 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 PRKACBP22694 351 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 PAX6P26367 422 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 MTCP1P56278 107 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 LGALS4P56470 323 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 EDDM3BP56851 147 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 LY6EQ16553 131 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 GDPD3Q7L5L3 318 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 C10orf67Q8IYJ2 551 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 ENTHD1Q8IYW4 607 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 OR8H2Q8N162 312 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 EMG1Q92979 244 aaKnown RBP15.38■□□□□ 0.05
VARS-220ENST00000461874 LGALS12Q96DT0 336 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 PELI1Q96FA3 418 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 TCF7L1Q9HCS4 588 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 GMPPBQ9Y5P6 360 aa15.38■□□□□ 0.05
VARS-220ENST00000461874 TRBV2A0A0J9YWF9 115 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 FAM90A8PA6NJQ4 464 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 J3QLW9 94 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 HAND1O96004 215 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 RBP4P02753 201 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 ZNF19P17023 458 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 ZNF20P17024 532 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 AZGP1P25311 298 aaKnown RBP15.37■□□□□ 0.05
VARS-220ENST00000461874 NPBWR2P48146 333 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 POU3F4P49335 361 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 MEF2CQ06413 473 aaPredicted RBP15.37■□□□□ 0.05
VARS-220ENST00000461874 CRIP3Q6Q6R5 217 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 PPP1R35Q8TAP8 253 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 C4orf36Q96KX1 117 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 RBFOX1Q9NWB1 397 aaKnown RBP15.37■□□□□ 0.05
VARS-220ENST00000461874 IL36RNQ9UBH0 155 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 FBLN5Q9UBX5 448 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 HHLA2Q9UM44 414 aa15.37■□□□□ 0.05
VARS-220ENST00000461874 MEX3AA1L020 520 aaKnown RBP15.36■□□□□ 0.05
VARS-220ENST00000461874 OR4C45A6NMZ5 311 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 CYB5AP00167 134 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 IGHA1P01876 353 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 BCL3P20749 454 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 GABRA5P31644 462 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 ACTA2P62736 377 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 ACTG2P63267 376 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 ZNF91Q05481 1191 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 PDZK1IP1Q13113 114 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 LHFPL2Q6ZUX7 228 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 TCF23Q7RTU1 214 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 LHFPL4Q7Z7J7 247 aa15.36■□□□□ 0.05
VARS-220ENST00000461874 FAM58AQ8N1B3 248 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms